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NC_048821.1__YP_009853552.1__HWC77_gp200__00200

Bact-Vir

Identity

Accession:: NC_048821 ↗
Kingdom:: phage

Quality

70.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Aphroditevirus› Photobacterium_phage_PDCC-1

TaxID: 2664246

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-162

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3fb9B00	2.30.30.100	Mainly Beta › Roll › SH3 type barrels. ›	0.52	25.0	3.36e-01	80.9%	83.3%
2z4hA01	2.40.128.300	Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain	0.51	28.0	3.67e-01	78.9%	100.0%
3p8bB02	2.30.30.30	Mainly Beta › Roll › SH3 type barrels. ›	0.51	22.0	3.31e-01	81.6%	98.4%

ECOD (13)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3802306	284.1.2.0 ↗	a+b two layers › FKBP-like › FKBP-like › Conserved carboxy-terminal domain of oxidative-stress-responsive kinase 1-like kinases	0.56	31.0	3.82e-01	77.6%	85.3%
3514912	284.1.3.0 ↗	a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain	0.55	28.0	3.82e-01	94.1%	96.0%
5042986	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.55	23.0	3.62e-01	86.8%	100.0%
3318685	284.1.3.2 ↗	a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C	0.55	30.0	3.58e-01	77.6%	77.1%
3805804	284.1.3.0 ↗	a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain	0.54	29.0	3.82e-01	76.3%	92.9%
4534466	284.1.3.0 ↗	a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain	0.54	28.0	3.44e-01	96.1%	77.9%
3819740	284.1.3.4 ↗	a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK	0.54	30.0	3.80e-01	77.6%	91.1%
3295575	284.1.3.2 ↗	a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C	0.53	29.0	3.51e-01	77.0%	81.0%
3999725	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.52	29.0	3.65e-01	94.7%	94.1%
3924597	330.16.1.0 ↗	a+b two layers › dsRBD-like › ODA16 N-terminal domain › ODA16 N-terminal domain	0.52	24.0	3.47e-01	96.1%	95.7%
3395150	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.50	22.0	3.27e-01	82.9%	100.0%
3368864	4.1.1.42 ↗	beta barrels › SH3 › SH3 › SH3 › Agenet	0.50	23.0	3.35e-01	80.9%	98.5%
3812869	284.1.3.0 ↗	a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain	0.50	31.0	3.76e-01	91.4%	93.0%

D2 high residues 176-335

PDB

Domain cluster: representative

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2nvnA00	2.30.31.10	Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A	0.67	38.0	4.32e-01	92.5%	72.5%
2ea9A01	3.30.450.20	Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain	0.60	27.0	3.42e-01	77.5%	68.1%
2ra8A01	2.20.140.10	Mainly Beta › Single Sheet › q64v53_bacfr protein fold › WGR domain	0.51	25.0	3.49e-01	80.0%	97.3%
3cwxA00	3.40.1420.20	Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Pathogenicity island component CagD	0.51	30.0	3.35e-01	85.6%	72.8%
3ge2A00	2.40.128.50	Mainly Beta › Beta Barrel › Lipocalin ›	0.50	27.0	3.58e-01	76.9%	94.4%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3546306	292.2.1.1 ↗	a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box	0.60	29.0	3.69e-01	88.7%	76.8%
4929701	4100.1.1.0 ↗	a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like	0.59	24.0	3.72e-01	89.4%	96.7%
3960834	10.1.1.0 ↗	beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases	0.57	37.0	4.18e-01	90.0%	85.8%
3354048	220.1.1.163 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7046	0.50	27.0	3.34e-01	75.0%	82.0%