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NC_048824.1__YP_009853776.1__HWC80_gp024__00024
Bact-VirNC_048824.1__YP_009853776.1__HWC80_gp024__00024
Identity
- Accession:
- NC_048824 ↗
- Kingdom:
- phage
Quality
50.1
mean pLDDT
Taxonomy
TaxID: 2656582
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1230-1261_1279-1360
D2
high
residues 1382-1516
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hz9A00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.66 | 53.0 | 5.59e-01 | 95.6% | 96.6% |
| 2k3aA01 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.63 | 44.0 | 5.00e-01 | 71.9% | 100.0% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3956333 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.87 | 75.0 | 7.66e-01 | 96.3% | 93.1% |
| 4882197 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.64 | 45.0 | 4.78e-01 | 71.9% | 92.4% |
| 4031159 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.63 | 50.0 | 4.79e-01 | 83.7% | 95.5% |
| 3964422 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.60 | 55.0 | 5.24e-01 | 99.3% | 98.8% |
| 3164898 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.56 | 33.0 | 3.77e-01 | 83.0% | 81.1% |
| 3389175 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.54 | 33.0 | 3.86e-01 | 87.4% | 88.9% |
| 3230520 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.54 | 32.0 | 3.80e-01 | 87.4% | 88.9% |
| 3503815 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.53 | 31.0 | 3.70e-01 | 77.8% | 89.4% |
| 3407848 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.53 | 34.0 | 3.86e-01 | 99.3% | 90.5% |
| 3414167 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 31.0 | 2.69e-01 | 85.9% | 38.0% |
| 3389311 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 33.0 | 3.77e-01 | 88.9% | 91.0% |
D3
medium
residues 269-426
Domain cluster:
rep: MN698245.1__QGZ18159.1__HTVC111P_gp46__00046__D46-220
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF20155.5 best | TMP_3 | 47.4 | 2.70e-12 | 100.0% | 84.9% |
D4
medium
residues 607-696
D5
medium
residues 730-845
D6
medium
residues 1576-1636
D7
medium
residues 1764-1847