←Back to structures
NC_048828.1__YP_009854274.1__HWC84_gp036__00036
Bact-VirNC_048828.1__YP_009854274.1__HWC84_gp036__00036
Identity
- Accession:
- NC_048828 ↗
- Kingdom:
- phage
Quality
89.1
mean pLDDT
Taxonomy
TaxID: 2678601
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-88
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7qi3A01 | 3.30.2140.20 | Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › | 0.58 | 42.0 | 2.88e-01 | 75.9% | 45.7% |
| 1ukxA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.57 | 39.0 | 3.40e-01 | 100.0% | 45.3% |
| 5dnoA00 | 3.10.590.10 | Alpha Beta › Roll › ph1033 like fold › ph1033 like domains | 0.55 | 43.0 | 3.60e-01 | 88.5% | 87.8% |
| 1kbaA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.54 | 31.0 | 3.42e-01 | 90.8% | 71.2% |
| 1twfB04 | 3.90.1110.10 | Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 | 0.53 | 36.0 | 2.97e-01 | 70.1% | 89.3% |
| 1914A00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.52 | 33.0 | 2.68e-01 | 100.0% | 32.7% |
| 1c3kA00 | 2.100.10.30 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain | 0.52 | 38.0 | 3.31e-01 | 98.9% | 48.3% |
| 1fuiA03 | 3.20.14.10 | Alpha Beta › Alpha-Beta Barrel › L-fucose Isomerase; Chain A, domain 3 › L-fucose/L-arabinose isomerase, C-terminal | 0.51 | 39.0 | 2.87e-01 | 83.9% | 52.2% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3899997 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.68 | 37.0 | 3.13e-01 | 82.8% | 33.6% |
| 3381505 | 3767.1.1.0 ↗ | a+b two layers › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain | 0.64 | 56.0 | 4.40e-01 | 97.7% | 69.7% |
| 3818303 | 3767.1.1.0 ↗ | a+b two layers › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain | 0.64 | 55.0 | 4.50e-01 | 97.7% | 72.9% |
| 2462166 | 3333.1.1.1 ↗ | a+b two layers › Barrel domain in dedicator of cytokinesis protein 9 › Barrel domain in dedicator of cytokinesis protein 9 › Barrel domain in dedicator of cytokinesis protein 9 › DHR-2_Lobe_B | 0.57 | 46.0 | 3.87e-01 | 88.5% | 98.1% |
| 3254677 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.56 | 39.0 | 3.66e-01 | 100.0% | 58.2% |
| 4598948 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.54 | 31.0 | 3.41e-01 | 95.4% | 70.8% |
| 3331262 | 216.1.1.20 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like | 0.54 | 39.0 | 3.83e-01 | 100.0% | 69.5% |
| 3380840 | 220.1.1.180 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7642 | 0.53 | 35.0 | 3.30e-01 | 100.0% | 53.6% |
| 3592795 | 206.1.3.16 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Ins134_P3_kin | 0.50 | 43.0 | 3.09e-01 | 100.0% | 57.9% |