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NC_048832.1__YP_009854700.1__HWC88_gp48__00048

Bact-Vir

NC_048832.1__YP_009854700.1__HWC88_gp48__00048

Identity

Accession:
NC_048832 ↗
Kingdom:
phage

Quality

87.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Hattifnattvirus› Flavobacterium_phage_vB_FspS_hattifnatt9-1

TaxID: 2686246

Cluster

View cluster (8 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 42-135
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07105.17 best DUF1367 39.5 7.30e-10 84.0% 30.8%
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1pc6A00 1.10.3790.10 Mainly Alpha › Orthogonal Bundle › NinB fold › NinB 0.71 61.0 5.35e-01 100.0% 63.1%
1xb4B02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 28.0 3.14e-01 100.0% 52.0%
2dr1A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.57 46.0 4.11e-01 87.2% 68.1%
2xzmT00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 44.0 3.78e-01 83.0% 98.0%
3g2bA00 1.10.10.1150 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Coenzyme PQQ synthesis protein D (PqqD) 0.56 28.0 2.85e-01 88.3% 46.7%
1vx4407 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 33.0 3.73e-01 98.9% 81.2%
2dy1A03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.54 36.0 3.97e-01 94.7% 84.2%
3u37A02 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.54 45.0 3.29e-01 89.4% 85.5%
3jcmH04 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.54 37.0 4.02e-01 96.8% 87.0%
2kjwA00 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.54 41.0 4.16e-01 98.9% 81.2%
7k98E03 3.30.56.10 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › 0.53 36.0 4.09e-01 90.4% 95.6%
5n1qB02 3.30.70.470 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 46.0 4.03e-01 100.0% 87.1%
7r0kA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.52 42.0 3.59e-01 91.5% 96.4%
3lwsF02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.52 40.0 3.89e-01 83.0% 90.4%
3sqgB02 3.30.70.470 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 45.0 3.94e-01 100.0% 86.9%
1fc4A02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.51 43.0 3.85e-01 93.6% 67.6%
2bm0A03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.51 23.0 3.05e-01 89.4% 78.4%
8dqaA01 3.30.429.10 Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor 0.51 43.0 4.27e-01 91.5% 94.9%
3wy7D01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.51 41.0 3.78e-01 87.2% 76.7%
3kkiA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.50 41.0 3.48e-01 87.2% 59.7%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3980273 829.1.1.3 ↗ a+b duplicates or obligate multimers › NinB › NinB › NinB › DUF1367 0.89 85.0 7.57e-01 100.0% 79.2%
5079949 829.1.1.3 ↗ a+b duplicates or obligate multimers › NinB › NinB › NinB › DUF1367 0.88 83.0 8.29e-01 100.0% 97.9%
7698 829.1.1.1 ↗ a+b duplicates or obligate multimers › NinB › NinB › NinB › NinB 0.71 61.0 5.35e-01 100.0% 63.1%
4070661 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.57 38.0 4.43e-01 78.7% 100.0%
3575870 3016.1.1.22 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › PDXDC1-like_cen2 0.53 43.0 3.62e-01 87.2% 68.8%
3798298 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.53 42.0 3.57e-01 87.2% 68.8%
4331101 304.28.1.2 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Sec_GG 0.53 42.0 4.37e-01 98.9% 96.5%
3941407 101.1.2.135 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.52 46.0 3.96e-01 95.7% 75.9%
5011097 327.11.2.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.52 34.0 3.80e-01 81.9% 84.0%
3686939 3016.1.1.0 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.51 39.0 3.70e-01 83.0% 100.0%
3898373 5001.1.1.3 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_2 0.51 41.0 2.98e-01 88.3% 90.2%
4968963 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.51 37.0 3.98e-01 94.7% 91.3%
4505732 304.28.1.2 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Sec_GG 0.51 41.0 4.17e-01 98.9% 90.5%