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NC_048841.1__YP_009855317.1__HWC97_gp34__00034
Bact-VirNC_048841.1__YP_009855317.1__HWC97_gp34__00034
Identity
- Accession:
- NC_048841 ↗
- Kingdom:
- phage
Quality
84.2
mean pLDDT
Taxonomy
TaxID: 2686273
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-29
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3dmgA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.86 | 71.0 | 4.30e-01 | 100.0% | 15.3% |
| 3tqdA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.77 | 61.0 | 3.63e-01 | 100.0% | 14.4% |
| 2rirA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.76 | 60.0 | 3.91e-01 | 100.0% | 35.4% |
| 4xqcA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.75 | 59.0 | 3.70e-01 | 100.0% | 16.3% |
| 6ckmA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.70 | 55.0 | 3.36e-01 | 100.0% | 16.0% |
| 6c49A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.70 | 54.0 | 3.58e-01 | 100.0% | 32.7% |
| 6ifdB00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.70 | 58.0 | 3.50e-01 | 100.0% | 15.4% |
| 4hjhA02 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.69 | 53.0 | 4.08e-01 | 100.0% | 65.4% |
| 1qwjB00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.68 | 55.0 | 3.29e-01 | 100.0% | 17.5% |
| 1xtzA01 | 3.40.50.1360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.65 | 49.0 | 3.18e-01 | 96.6% | 16.7% |
| 5towB02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.65 | 52.0 | 3.34e-01 | 100.0% | 27.5% |
| 3h75A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.65 | 50.0 | 3.28e-01 | 82.8% | 37.4% |
| 3eeqB03 | 3.30.420.180 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › CobE/GbiG C-terminal domain | 0.64 | 45.0 | 3.37e-01 | 100.0% | 29.0% |
| 3iusB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.63 | 46.0 | 2.80e-01 | 100.0% | 27.8% |
| 1o98A01 | 3.40.1450.10 | Alpha Beta › 3-Layer(aba) Sandwich › 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain › BPG-independent phosphoglycerate mutase, domain B | 0.63 | 45.0 | 2.83e-01 | 100.0% | 40.3% |
| 3moiA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 50.0 | 3.22e-01 | 100.0% | 36.0% |
| 4wi1A03 | 3.30.110.30 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › C-terminal domain of ProRS | 0.60 | 41.0 | 3.40e-01 | 96.6% | 91.4% |
| 4fk1A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.60 | 44.0 | 3.25e-01 | 100.0% | 48.2% |
| 4b3lA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.59 | 51.0 | 2.86e-01 | 100.0% | 21.5% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4946039 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.95 | 69.0 | 4.37e-01 | 79.3% | 17.7% |
| 3603907 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.92 | 72.0 | 4.43e-01 | 86.2% | 16.7% |
| 4997581 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.90 | 73.0 | 4.56e-01 | 89.7% | 18.6% |
| 4974557 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.87 | 66.0 | 4.19e-01 | 86.2% | 17.9% |
| 4973980 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.87 | 69.0 | 4.37e-01 | 89.7% | 18.6% |
| 5075020 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.86 | 68.0 | 4.31e-01 | 89.7% | 18.6% |
| 5046639 | 2007.1.14.19 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Mut7-C | 0.86 | 75.0 | 5.00e-01 | 100.0% | 30.5% |
| 4963568 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.84 | 71.0 | 5.17e-01 | 100.0% | 36.3% |
| 4973204 | 2003.1.1.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N | 0.83 | 66.0 | 4.53e-01 | 100.0% | 27.0% |
| 4250283 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.83 | 67.0 | 4.68e-01 | 100.0% | 27.6% |
| 5071580 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.83 | 63.0 | 3.91e-01 | 89.7% | 15.3% |
| 3960495 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.81 | 64.0 | 4.07e-01 | 100.0% | 18.0% |
| 3602587 | 2003.1.5.33 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0146 | 0.80 | 65.0 | 4.25e-01 | 100.0% | 40.7% |
| 5081666 | 2003.1.1.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N | 0.79 | 67.0 | 4.45e-01 | 100.0% | 24.2% |
| 4141570 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.79 | 68.0 | 4.15e-01 | 100.0% | 44.1% |
| 4951498 | 284.1.1.0 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like | 0.79 | 65.0 | 4.45e-01 | 100.0% | 54.3% |
| 4956372 | 2007.24.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › AtpF-like › AtpF-like | 0.78 | 61.0 | 4.67e-01 | 100.0% | 37.5% |
| 4997075 | 7516.1.1.10 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CofC | 0.77 | 63.0 | 3.94e-01 | 100.0% | 18.2% |
| 4450155 | 2003.1.5.151 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23, Methyltransf_25 | 0.77 | 63.0 | 3.69e-01 | 100.0% | 11.6% |
| 5002243 | 2003.1.5.46 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS | 0.77 | 63.0 | 3.81e-01 | 100.0% | 39.5% |
| 3971137 | 2003.1.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ADH_zinc_N | 0.76 | 61.0 | 3.90e-01 | 100.0% | 31.2% |
| 4682076 | 7516.1.1.11 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CTP_transf_3 | 0.76 | 61.0 | 3.58e-01 | 100.0% | 60.4% |
| 1556855 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.75 | 60.0 | 3.29e-01 | 100.0% | 6.1% |
| 3274341 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.75 | 60.0 | 3.45e-01 | 100.0% | 15.9% |
| 4347584 | 2003.1.5.68 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS_N | 0.72 | 61.0 | 3.93e-01 | 100.0% | 35.9% |
| 5010846 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.72 | 55.0 | 3.49e-01 | 100.0% | 28.3% |
| None | — | 0.71 | 58.0 | 3.65e-01 | 100.0% | 32.1% | |
| 4953504 | 7516.1.1.11 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CTP_transf_3 | 0.71 | 57.0 | 3.43e-01 | 100.0% | 16.0% |
| 3387421 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.70 | 52.0 | 3.45e-01 | 96.6% | 19.3% |
| 2507438 | 7516.1.1.11 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CTP_transf_3 | 0.70 | 58.0 | 3.50e-01 | 100.0% | 15.4% |
| 3215522 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.63 | 43.0 | 2.95e-01 | 100.0% | 17.5% |
| 1096276 | 2003.1.1.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Semialdhyde_dh | 0.62 | 51.0 | 3.44e-01 | 100.0% | 22.8% |