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NC_048844.1__YP_009855493.1__HWD00_gp07__00007
Bact-VirNC_048844.1__YP_009855493.1__HWD00_gp07__00007
Identity
- Accession:
- NC_048844 ↗
- Kingdom:
- phage
Quality
90.8
mean pLDDT
Taxonomy
TaxID: 2686279
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-54
Domain cluster:
rep: OR089151.1__WIT94455.1__CRP19_000024__00024__D7-55
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u3eM02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 68.0 | 6.19e-01 | 100.0% | 76.5% |
| 1g6gB00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.71 | 62.0 | 4.66e-01 | 100.0% | 96.0% |
| 2w9xB01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.69 | 45.0 | 3.60e-01 | 100.0% | 34.0% |
| 1o54A01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.68 | 58.0 | 5.23e-01 | 100.0% | 80.6% |
| 1j3qB00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.67 | 44.0 | 3.01e-01 | 100.0% | 19.1% |
| 2mngA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.65 | 48.0 | 3.53e-01 | 100.0% | 30.5% |
| 2f4pA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 45.0 | 3.29e-01 | 100.0% | 27.6% |
| 2d93A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 47.0 | 3.42e-01 | 100.0% | 29.9% |
| 2e8yA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 47.0 | 3.87e-01 | 100.0% | 44.2% |
| 4gi3C00 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.62 | 44.0 | 4.24e-01 | 98.0% | 64.9% |
| 3es1A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 41.0 | 3.09e-01 | 100.0% | 27.0% |
| 3l5iA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 45.0 | 3.75e-01 | 100.0% | 46.6% |
| 2l6oA01 | 2.40.10.320 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Uncharacterised protein PF13642 yp_926445, N-terminal domain | 0.59 | 45.0 | 4.11e-01 | 100.0% | 59.7% |
| 2mj6A00 | 3.30.450.250 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.58 | 43.0 | 3.54e-01 | 100.0% | 44.4% |
| 2dwcB02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.58 | 38.0 | 3.67e-01 | 96.0% | 57.6% |
| 2cw8A01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.58 | 49.0 | 3.46e-01 | 100.0% | 38.5% |
| 3glkA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.55 | 42.0 | 4.06e-01 | 100.0% | 72.9% |
| 2xqyA03 | 2.60.40.3190 | Mainly Beta › Sandwich › Immunoglobulin-like › Herpesvirus glycoprotein H, C-terminal domain | 0.55 | 47.0 | 3.45e-01 | 100.0% | 36.1% |
| 1l0qA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 36.0 | 3.07e-01 | 100.0% | 40.0% |
| 3buuB00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.54 | 42.0 | 2.93e-01 | 100.0% | 83.6% |
| 4iajA00 | 3.30.1490.390 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Protein of unknown function DUF4649 | 0.54 | 42.0 | 3.73e-01 | 90.0% | 82.9% |
| 1eerC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 47.0 | 3.76e-01 | 100.0% | 51.5% |
| 6m3yA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 41.0 | 3.41e-01 | 100.0% | 92.2% |
| 3laaA00 | 2.150.10.10 | Mainly Beta › 2 Solenoid › Alkaline Protease, subunit P, domain 1 › Serralysin-like metalloprotease, C-terminal | 0.52 | 34.0 | 2.40e-01 | 88.0% | 19.5% |
| 4b29A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 34.0 | 2.41e-01 | 100.0% | 17.4% |
| 1ywlA00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.52 | 43.0 | 3.60e-01 | 100.0% | 52.1% |
| 1pqsA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 37.0 | 3.34e-01 | 100.0% | 53.2% |
| 2vfrA02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.51 | 36.0 | 2.81e-01 | 78.0% | 82.3% |
| 2mctA00 | 2.60.40.4250 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 43.0 | 3.51e-01 | 100.0% | 55.9% |
| 1mhxA00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.51 | 38.0 | 3.58e-01 | 84.0% | 86.2% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2876 | 101.1.14.2 ↗ | alpha arrays › HTH › HTH › DNA-binding domain of intron-encoded endonucleases › I-HmuI_NUMOD-like | 0.78 | 69.0 | 6.19e-01 | 100.0% | 75.4% |
| 4060964 | 11.2.1.36 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › MAP10_N | 0.74 | 64.0 | 4.51e-01 | 100.0% | 97.5% |
| 3315163 | 3125.1.1.1 ↗ | alpha arrays › Asl3597 › Asl3597 › Asl3597 › CRR7 | 0.72 | 62.0 | 5.46e-01 | 100.0% | 100.0% |
| 3576112 | 206.1.3.57 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › FAM91_C | 0.69 | 51.0 | 3.25e-01 | 100.0% | 17.0% |
| 3764626 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.66 | 45.0 | 3.44e-01 | 100.0% | 31.3% |
| 3218303 | 379.1.1.3 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_2 | 0.66 | 47.0 | 4.88e-01 | 100.0% | 82.2% |
| 3761259 | 206.1.3.57 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › FAM91_C | 0.65 | 47.0 | 3.03e-01 | 100.0% | 16.7% |
| 3404255 | 379.1.1.1 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_1 | 0.65 | 50.0 | 5.06e-01 | 100.0% | 84.0% |
| 3404558 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.62 | 46.0 | 4.63e-01 | 100.0% | 80.0% |
| 3941506 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.61 | 44.0 | 2.73e-01 | 100.0% | 11.9% |
| 4566976 | 375.14.2.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS2) | 0.60 | 42.0 | 4.51e-01 | 100.0% | 92.5% |
| 5020380 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.59 | 49.0 | 3.38e-01 | 100.0% | 28.5% |
| 4024700 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.58 | 41.0 | 2.45e-01 | 76.0% | 44.4% |
| 3944717 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 43.0 | 2.83e-01 | 90.0% | 44.0% |
| 3960590 | 210.1.3.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases | 0.56 | 48.0 | 3.25e-01 | 100.0% | 30.5% |
| 3168268 | 11.2.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PI3K_C2 | 0.56 | 46.0 | 3.11e-01 | 100.0% | 83.6% |
| 3935683 | 206.1.3.57 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › FAM91_C | 0.55 | 48.0 | 3.06e-01 | 100.0% | 35.7% |
| 4018289 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.54 | 47.0 | 3.39e-01 | 100.0% | 40.7% |
| 3608445 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.53 | 48.0 | 3.38e-01 | 100.0% | 46.0% |
| 4668790 | 3784.1.1.6 ↗ | a+b two layers › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related › PF26353 | 0.53 | 47.0 | 3.83e-01 | 100.0% | 52.6% |
| 3612291 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.53 | 44.0 | 2.74e-01 | 98.0% | 16.1% |
| 5001166 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.51 | 38.0 | 2.85e-01 | 82.0% | 80.7% |
| 3938023 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 41.0 | 3.46e-01 | 100.0% | 55.0% |
| 5008037 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.51 | 42.0 | 3.28e-01 | 100.0% | 76.0% |
| 3817222 | 221.1.1.1 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Fer2 | 0.51 | 40.0 | 3.52e-01 | 100.0% | 69.7% |