←Back to structures

NC_048844.1__YP_009855503.1__HWD00_gp17__00017

Bact-Vir

Identity

Accession:: NC_048844 ↗
Kingdom:: phage

Quality

82.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Muminvirus› Flavobacterium_phage_vB_FspS_tooticki6-1

TaxID: 2686279

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-94

PDB

Domain cluster: representative

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2cazD00	6.10.140.820	Special › Helix non-globular › Helix Hairpins ›	0.68	39.0	4.45e-01	94.0%	78.3%
2wmmA01	1.20.5.420	Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C	0.64	35.0	4.25e-01	78.6%	89.8%
2m2lA00	2.40.50.40	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) ›	0.59	33.0	3.61e-01	97.6%	67.2%
1qv9A02	6.10.140.120	Special › Helix non-globular › Helix Hairpins ›	0.57	40.0	3.75e-01	76.2%	59.2%
2o6yA02	1.20.200.10	Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain)	0.56	44.0	3.08e-01	89.3%	40.1%
2kkmA01	1.20.1440.170	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Translation machinery-associated protein 16-like	0.55	45.0	3.99e-01	100.0%	60.8%
7drjB01	1.20.120.1760	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain	0.54	43.0	3.39e-01	100.0%	39.9%
5fbhA01	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.52	42.0	2.96e-01	90.5%	91.2%
1tjlA00	1.20.120.910	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain	0.50	41.0	3.52e-01	97.6%	53.8%
4g12A02	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.50	39.0	3.31e-01	85.7%	69.1%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3723174	192.2.1.0 ↗	alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin	0.72	46.0	4.82e-01	86.9%	72.0%
4083492	192.4.1.1 ↗	alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29	0.71	38.0	4.21e-01	96.4%	66.2%
4432230	109.4.1.170 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CLASP_N	0.69	37.0	2.20e-01	97.6%	7.5%
3355246	192.1.1.0 ↗	alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain	0.67	43.0	4.44e-01	86.9%	68.8%
4004355	375.1.9.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase	0.62	41.0	3.80e-01	70.2%	53.3%
3599305	650.1.1.0 ↗	alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain	0.61	38.0	3.91e-01	100.0%	65.0%
4026202	192.15.1.0 ↗	alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains	0.59	39.0	3.82e-01	98.8%	62.2%
4613072	101.1.2.721 ↗	alpha arrays › HTH › HTH › winged helix domain › MarR_2, PF27113	0.56	49.0	4.00e-01	98.8%	83.0%
3417174	174.1.1.0 ↗	few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain	0.55	40.0	3.41e-01	100.0%	45.1%
3618144	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.53	47.0	3.15e-01	96.4%	36.4%
3296310	633.22.1.0 ↗	alpha bundles › Bromodomain-like › Vitamin K epoxide reductase (VKOR) › Vitamin K epoxide reductase (VKOR)	0.50	44.0	3.40e-01	100.0%	73.0%