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NC_048844.1__YP_009855537.1__HWD00_gp51__00051
Bact-VirNC_048844.1__YP_009855537.1__HWD00_gp51__00051
Identity
- Accession:
- NC_048844 ↗
- Kingdom:
- phage
Quality
85.2
mean pLDDT
Taxonomy
TaxID: 2686279
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-156
Domain cluster:
rep: MZ447863.1__QXN68086.1__X__00050__D7-160
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fz2A00 | 3.30.70.1700 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phage minor tail protein U | 0.76 | 59.0 | 6.12e-01 | 99.3% | 88.3% |
| 6toaF01 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.68 | 54.0 | 5.60e-01 | 100.0% | 90.0% |
| 1cg2A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 35.0 | 3.94e-01 | 73.6% | 64.5% |
| 2gjvA00 | 3.30.2000.10 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like | 0.66 | 52.0 | 5.34e-01 | 100.0% | 86.0% |
| 2f7vA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 36.0 | 4.02e-01 | 86.4% | 67.6% |
| 4ewtA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 36.0 | 3.96e-01 | 81.4% | 63.5% |
| 4frwA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 33.0 | 3.98e-01 | 77.1% | 70.8% |
| 6dw1A00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.64 | 48.0 | 4.13e-01 | 99.3% | 51.4% |
| 8c46A01 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 36.0 | 3.99e-01 | 74.3% | 68.4% |
| 3ramA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 36.0 | 3.93e-01 | 85.0% | 66.1% |
| 3jafA01 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.63 | 48.0 | 4.13e-01 | 99.3% | 52.1% |
| 3rqwA01 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.63 | 44.0 | 3.99e-01 | 95.0% | 53.2% |
| 2w8eA00 | 2.70.170.10 | Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain | 0.62 | 46.0 | 4.01e-01 | 99.3% | 51.7% |
| 3m86A00 | 2.60.40.2020 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 34.0 | 3.73e-01 | 92.1% | 66.7% |
| 6qdwt00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.60 | 38.0 | 4.49e-01 | 100.0% | 95.7% |
| 2vzsA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 34.0 | 3.71e-01 | 97.9% | 68.2% |
| 5uejA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 33.0 | 3.65e-01 | 90.7% | 65.8% |
| 7rsfA01 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 35.0 | 3.79e-01 | 80.7% | 70.2% |
| 2cz4A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 32.0 | 3.70e-01 | 86.4% | 77.8% |
| 2y8yA02 | 3.30.70.1210 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 | 0.54 | 34.0 | 3.71e-01 | 70.0% | 75.7% |
| 2ebeA00 | 3.30.70.2290 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Protein of unknown function (DUF3208) | 0.54 | 32.0 | 3.55e-01 | 95.7% | 74.5% |
| 1sh8B00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 35.0 | 3.48e-01 | 99.3% | 61.7% |
| 2k0rA00 | 2.60.40.1250 | Mainly Beta › Sandwich › Immunoglobulin-like › Thiol:disulfide interchange protein DsbD, N-terminal domain | 0.52 | 33.0 | 3.42e-01 | 97.9% | 67.2% |
| 1pjqA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 24.0 | 2.71e-01 | 95.0% | 51.8% |
| 2e3nA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 43.0 | 3.64e-01 | 88.6% | 76.6% |
| 3byqA00 | 3.30.1330.110 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › BB2672 | 0.51 | 45.0 | 4.07e-01 | 96.4% | 88.5% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5004177 | 304.124.1.3 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › DUF3168 | 0.72 | 54.0 | 5.73e-01 | 100.0% | 88.0% |
| 5083880 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.71 | 60.0 | 5.98e-01 | 100.0% | 88.3% |
| 4291659 | 304.124.1.8 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Phage_Mu_Gp37 | 0.67 | 55.0 | 5.54e-01 | 100.0% | 88.6% |
| 4809499 | 304.109.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e | 0.65 | 38.0 | 4.66e-01 | 74.3% | 92.9% |
| 3517061 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.63 | 45.0 | 3.98e-01 | 95.7% | 52.3% |
| 4163084 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.63 | 35.0 | 3.82e-01 | 85.7% | 65.2% |
| 3386604 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.62 | 36.0 | 3.91e-01 | 75.0% | 67.8% |
| 4935602 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.61 | 35.0 | 3.76e-01 | 91.4% | 64.2% |
| 3738615 | 304.109.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23 | 0.61 | 36.0 | 3.91e-01 | 94.3% | 69.6% |
| 3389767 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.60 | 48.0 | 4.01e-01 | 99.3% | 50.2% |
| 5071358 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.60 | 38.0 | 3.91e-01 | 80.7% | 66.9% |
| 3987934 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.59 | 35.0 | 3.73e-01 | 91.4% | 65.8% |
| 3727195 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.59 | 35.0 | 3.74e-01 | 90.7% | 65.8% |
| 4029363 | 304.20.1.2 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › Nrap_D3 | 0.59 | 35.0 | 3.37e-01 | 72.9% | 50.6% |
| 3290869 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.59 | 37.0 | 3.90e-01 | 85.0% | 69.6% |
| 4999156 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.58 | 34.0 | 3.71e-01 | 80.0% | 67.8% |
| 4940026 | 4081.1.1.17 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › DUF7345 | 0.58 | 45.0 | 4.22e-01 | 95.7% | 66.3% |
| 3406835 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 31.0 | 3.59e-01 | 86.4% | 74.0% |
| 3513366 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.56 | 49.0 | 4.53e-01 | 94.3% | 79.4% |
| 3699604 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.55 | 37.0 | 3.76e-01 | 85.0% | 68.9% |
| 4182477 | 304.109.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23 | 0.55 | 37.0 | 4.23e-01 | 100.0% | 96.0% |
| 4381821 | 314.1.1.11 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA_synthFbeta | 0.54 | 48.0 | 4.23e-01 | 98.6% | 88.6% |
| 3604793 | 304.109.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e | 0.53 | 42.0 | 4.11e-01 | 97.1% | 77.3% |
| 3252583 | 246.3.1.4 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos2 | 0.53 | 43.0 | 3.25e-01 | 87.1% | 65.7% |
| 4286671 | 218.2.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Ribosomal protein L22 › Ribosomal protein L22 › Ribosomal_L22 | 0.53 | 36.0 | 3.33e-01 | 70.0% | 66.1% |
| 5066391 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.50 | 36.0 | 3.65e-01 | 100.0% | 73.6% |