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NC_048848.1__YP_009855865.1__HWD04_gp25__00025

Bact-Vir

Identity

Accession:: NC_048848 ↗
Kingdom:: phage

Quality

87.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Arawnvirus› Butyrivibrio_phage_Arawn

TaxID: 2724180

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-68

PDB

Domain cluster: representative

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4qfvC02	1.25.40.20	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain	0.69	30.0	3.02e-01	100.0%	38.5%
2lmgA00	1.20.1270.10	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 ›	0.68	45.0	4.36e-01	98.5%	60.8%
3rrkA02	1.20.1460.20	Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 ›	0.64	54.0	4.23e-01	100.0%	49.7%
4n6cB00	1.20.120.450	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain	0.57	44.0	3.25e-01	84.8%	94.5%
8gccA03	1.10.268.10	Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3	0.57	51.0	4.39e-01	100.0%	82.7%
4m0mA03	1.20.1270.430	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 ›	0.57	38.0	3.59e-01	84.8%	57.0%
1tk1A00	3.40.1500.10	Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › Coproporphyrinogen III oxidase, aerobic	0.56	41.0	2.95e-01	80.3%	88.6%
3qx3A04	1.10.268.10	Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3	0.56	50.0	4.37e-01	100.0%	90.0%
3fayA00	1.10.506.10	Mainly Alpha › Orthogonal Bundle › GTPase Activation - p120GAP; domain 1 › GTPase Activation - p120gap; domain 1	0.53	46.0	2.88e-01	100.0%	17.4%
3rlbA00	1.10.1760.20	Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 ›	0.51	45.0	3.33e-01	100.0%	85.2%
3nqxA02	1.10.390.10	Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2	0.50	40.0	3.25e-01	93.9%	67.8%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4958879	140.1.1.7 ↗	alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_2	0.59	38.0	2.94e-01	98.5%	29.3%
4944836	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.57	41.0	4.20e-01	80.3%	78.5%
5017280	2002.1.1.172 ↗	a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C	0.56	48.0	3.21e-01	100.0%	93.1%
3974848	603.1.1.129 ↗	alpha bundles › STAT-like › t-snare proteins › t-snare proteins › FliP	0.55	45.0	3.20e-01	90.9%	85.2%
3630457	197.1.1.3 ↗	alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › ACBP	0.55	41.0	3.39e-01	83.3%	86.9%
5030281	140.1.1.7 ↗	alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_2	0.53	40.0	3.22e-01	84.8%	70.3%
3578231	197.1.1.3 ↗	alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › ACBP	0.53	46.0	4.41e-01	97.0%	92.0%
3699551	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.51	39.0	3.74e-01	83.3%	85.0%
55608	197.1.1.0 ↗	alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like	0.50	42.0	3.92e-01	97.0%	74.4%