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NC_048848.1__YP_009855884.1__HWD04_gp44__00044

Bact-Vir

NC_048848.1__YP_009855884.1__HWD04_gp44__00044

Identity

Accession:
NC_048848 ↗
Kingdom:
phage

Quality

82.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 84-215
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01464.26 best SLT 37.5 2.10e-09 87.1% 84.6%
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4c5fA02 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.89 83.0 7.51e-01 97.0% 100.0%
1qsaA03 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.89 85.0 7.60e-01 100.0% 88.4%
4yibA01 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.88 85.0 7.87e-01 100.0% 91.8%
4hjzA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.86 80.0 7.01e-01 97.0% 92.3%
3bkhA02 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.85 78.0 6.87e-01 97.0% 96.2%
6cfcA01 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.83 77.0 7.11e-01 97.0% 92.5%
153lA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.83 79.0 6.90e-01 100.0% 75.7%
2xqoA00 1.10.530.60 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.82 78.0 6.53e-01 100.0% 78.1%
4dq5B00 1.10.530.50 Mainly Alpha › Orthogonal Bundle › Lysozyme › Peptidase U40 0.82 71.0 6.62e-01 91.7% 90.0%
7k5cB01 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.80 69.0 6.45e-01 90.9% 83.6%
4qdnA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.73 60.0 6.30e-01 97.7% 95.8%
1am7A00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.72 63.0 5.93e-01 92.4% 98.1%
1hfxA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.68 58.0 6.02e-01 100.0% 96.7%
3fi7A01 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.68 59.0 6.03e-01 100.0% 93.8%
4kt3A00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.67 61.0 5.98e-01 100.0% 90.8%
2ahfA00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.54 41.0 2.97e-01 80.3% 72.7%
5d8cA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.51 35.0 3.57e-01 79.5% 71.4%
2lyiA01 1.10.274.60 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain 0.51 42.0 4.05e-01 89.4% 99.3%
2p6rA03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.50 41.0 3.52e-01 100.0% 53.7%
ECOD (39)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3964630 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.90 77.0 7.08e-01 98.5% 71.3%
3166094 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.89 84.0 7.52e-01 98.5% 97.1%
4515466 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.89 85.0 7.50e-01 100.0% 96.1%
3941811 235.1.1.32 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT, PF27553 0.89 85.0 7.66e-01 100.0% 90.0%
3965879 235.1.1.32 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT, PF27553 0.89 85.0 7.76e-01 100.0% 89.1%
4321901 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.89 85.0 7.44e-01 100.0% 90.8%
3978377 235.1.1.0 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.89 85.0 7.29e-01 100.0% 86.2%
3979308 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.89 85.0 7.56e-01 100.0% 97.1%
4164050 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.89 85.0 7.12e-01 100.0% 82.0%
4530587 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.88 80.0 7.02e-01 95.5% 90.8%
3944103 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.87 83.0 7.36e-01 100.0% 88.9%
3971115 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.87 83.0 7.54e-01 100.0% 93.5%
4258903 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.86 75.0 6.84e-01 90.2% 93.9%
2393514 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.86 81.0 7.05e-01 100.0% 91.1%
3317412 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.86 82.0 6.93e-01 100.0% 73.5%
3945171 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.85 78.0 7.52e-01 97.7% 86.9%
3970721 235.1.1.0 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.85 80.0 7.21e-01 100.0% 88.6%
4431057 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.85 81.0 7.83e-01 100.0% 95.9%
3985073 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.84 79.0 7.89e-01 98.5% 95.6%
3947473 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.84 78.0 7.45e-01 97.0% 86.7%
4010532 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.84 75.0 7.64e-01 93.2% 100.0%
5028353 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.84 79.0 7.05e-01 100.0% 92.8%
3381140 235.1.1.0 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.84 79.0 6.99e-01 99.2% 77.2%
3657952 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.83 78.0 6.64e-01 98.5% 77.0%
3839661 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.83 78.0 7.10e-01 100.0% 90.0%
3385979 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.82 77.0 6.70e-01 99.2% 77.4%
3969917 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.82 77.0 6.60e-01 100.0% 78.0%
3260862 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.81 61.0 6.70e-01 100.0% 93.6%
3587369 235.1.1.0 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.81 40.0 5.76e-01 79.5% 100.0%
3978932 235.1.1.35 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › DUF1615 0.79 74.0 6.34e-01 99.2% 92.9%
3582448 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.79 67.0 6.84e-01 88.6% 94.6%
4009649 632.3.1.13 alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain › DUF1615 0.78 72.0 6.74e-01 99.2% 88.1%
3205219 235.1.1.0 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.77 69.0 6.28e-01 94.7% 77.6%
3720940 235.1.1.0 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.76 70.0 6.27e-01 97.0% 76.6%
185214 235.1.1.14 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transglycosylas 0.75 47.0 5.69e-01 90.2% 95.5%
3968994 235.1.1.0 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.68 62.0 5.86e-01 98.5% 98.1%
4321419 4156.1.1.6 alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc 0.55 45.0 4.39e-01 100.0% 80.7%
3532518 148.1.3.206 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF31015 0.53 32.0 3.71e-01 76.5% 86.4%
4980214 4156.1.1.0 alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like 0.50 38.0 3.87e-01 100.0% 81.5%