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NC_048859.1__YP_009857368.1__HWD15_gp08__00008
Bact-VirNC_048859.1__YP_009857368.1__HWD15_gp08__00008
Identity
- Accession:
- NC_048859 ↗
- Kingdom:
- phage
Quality
91.6
mean pLDDT
Taxonomy
TaxID: 2713242
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-54
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4jzaA03 | 1.20.120.1720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.77 | 69.0 | 4.79e-01 | 98.0% | 39.2% |
| 3eofB00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.76 | 59.0 | 3.74e-01 | 84.0% | 38.4% |
| 1bkjA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.75 | 59.0 | 3.76e-01 | 84.0% | 39.1% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3564521 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.81 | 51.0 | 3.24e-01 | 100.0% | 15.2% |
| 3530636 | 192.29.1.103 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › TADA2A-like_3rd | 0.81 | 66.0 | 5.47e-01 | 94.0% | 51.8% |
| 3917386 | 233.1.1.1 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I | 0.74 | 59.0 | 4.05e-01 | 88.0% | 45.1% |
| 3428856 | 1145.1.1.1 ↗ | few secondary structure elements › nigellin-1.1 › nigellin-1.1 › nigellin-1.1 › Per1 | 0.71 | 62.0 | 4.89e-01 | 96.0% | 64.0% |
| 3708691 | 650.1.1.0 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain | 0.67 | 56.0 | 4.33e-01 | 92.0% | 43.6% |
| 4029955 | 4.1.1.85 ↗ | beta barrels › SH3 › SH3 › SH3 › MTR4_beta-barrel | 0.64 | 47.0 | 3.36e-01 | 78.0% | 98.6% |
| 3550844 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.62 | 50.0 | 3.45e-01 | 86.0% | 36.3% |