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NC_048892.1__YP_009860220.1__HWD53_gp81__00081

Bact-Vir

Identity

Accession:: NC_048892 ↗
Kingdom:: phage

Quality

91.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Saintgironsvirus› Leptospira_phage_LE1

TaxID: 137511

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-134

PDB

Domain cluster: rep: term4_saliva_scaffold_5_prodigal-single.1__X__X__00215__D34-142

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06114.20 best	Peptidase_M78	39.3	7.50e-10	80.0%	61.5%

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3dteA01	1.10.10.2910	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A ›	0.77	65.0	6.71e-01	100.0%	94.0%
3e3vA03	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.65	28.0	3.98e-01	100.0%	87.5%
5iduA01	1.10.540.10	Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain	0.53	31.0	3.24e-01	100.0%	59.2%
4p02B04	3.30.379.30	Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 ›	0.53	42.0	3.91e-01	84.0%	84.9%
3itlD00	3.20.20.150	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes	0.53	47.0	3.31e-01	100.0%	87.1%

ECOD (21)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4954380	2498.1.1.29 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78	0.84	73.0	6.34e-01	100.0%	62.8%
5083216	2498.1.1.29 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78	0.84	72.0	6.28e-01	100.0%	62.8%
3953551	2498.1.1.29 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78	0.82	67.0	5.57e-01	100.0%	53.0%
3953982	2498.1.1.29 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78	0.79	73.0	6.00e-01	98.4%	61.4%
3589463	2498.1.1.29 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78	0.76	58.0	5.34e-01	82.4%	63.9%
4961836	2498.1.1.0 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain"	0.75	57.0	5.50e-01	81.6%	70.0%
3291444	2498.1.1.0 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain"	0.75	70.0	6.56e-01	100.0%	95.3%
3289507	2498.1.1.0 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain"	0.73	68.0	6.54e-01	100.0%	97.1%
3286933	2498.1.1.0 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain"	0.71	64.0	6.25e-01	99.2%	91.0%
4299003	2498.1.1.103 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SpoVR	0.70	54.0	4.16e-01	80.0%	52.5%
4964858	2498.1.1.103 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SpoVR	0.69	53.0	3.81e-01	79.2%	42.6%
5018719	2498.1.1.17 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like	0.66	42.0	3.80e-01	79.2%	47.1%
4024134	2498.1.1.65 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › MATCAP	0.63	48.0	3.45e-01	80.0%	61.9%
4967466	2498.1.1.0 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain"	0.63	44.0	4.76e-01	79.2%	85.7%
5030912	2498.1.1.0 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain"	0.61	46.0	3.57e-01	79.2%	41.4%
4523900	2498.1.1.60 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › DUF2268	0.60	46.0	4.00e-01	79.2%	56.1%
4954771	2498.1.1.0 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain"	0.59	44.0	3.99e-01	77.6%	76.5%
3604193	2498.1.1.0 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain"	0.55	42.0	4.00e-01	78.4%	73.8%
3110622	2498.1.1.24 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M61	0.55	46.0	3.56e-01	88.8%	46.2%
4861562	2498.2.1.1 ↗	mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain › Glyco_hydro_20b	0.54	42.0	4.46e-01	81.6%	96.3%
4094055	304.56.1.2 ↗	a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2	0.51	24.0	2.67e-01	96.8%	52.4%