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NC_049340.1__YP_009873762.1__HYO65_gp078__00078

Bact-Vir

NC_049340.1__YP_009873762.1__HYO65_gp078__00078

Identity

Accession:
NC_049340 ↗
Kingdom:
phage

Quality

91.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Shirahamavirus› Tenacibaculum_phage_PTm1

TaxID: 2547425

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-12_94-157
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1o0uA02 3.40.50.10180 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycerate kinase, MOFRL-like N-terminal domain 0.68 50.0 3.46e-01 76.4% 50.7%
1h99A02 1.10.1790.10 Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain 0.60 50.0 4.45e-01 93.1% 89.6%
2z6vA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 51.0 3.19e-01 94.4% 65.1%
1nnhA00 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.59 45.0 3.02e-01 81.9% 77.5%
1rykA00 1.10.1470.10 Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › YjbJ 0.58 45.0 4.62e-01 86.1% 95.7%
2ymmA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.58 45.0 4.50e-01 84.7% 100.0%
4behA01 1.10.10.1410 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.57 39.0 4.11e-01 70.8% 87.5%
1wlzA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.57 39.0 3.79e-01 72.2% 93.8%
1x42A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.56 41.0 3.98e-01 80.6% 96.4%
1kn1B00 1.10.490.20 Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins 0.54 42.0 3.27e-01 84.7% 70.2%
2vxdA00 1.10.10.2100 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Nucleophosmin, C-terminal domain 0.54 35.0 3.92e-01 90.3% 88.9%
1g2rA00 3.30.1230.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › YlxR-like 0.52 39.0 3.65e-01 81.9% 88.3%
4mvfA03 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.52 46.0 3.48e-01 100.0% 54.0%
3smvA02 1.10.150.750 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.50 39.0 3.89e-01 87.5% 100.0%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3485261 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.66 46.0 4.13e-01 73.6% 70.5%
3915390 108.1.1.28 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 0.65 46.0 4.02e-01 73.6% 72.7%
5068885 102.1.1.11 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_Rpb4 0.63 46.0 4.31e-01 79.2% 72.2%
4995181 102.1.1.11 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_Rpb4 0.62 51.0 4.17e-01 91.7% 74.8%
5011535 2006.1.1.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.61 48.0 3.36e-01 86.1% 34.9%
4989874 2004.1.1.76 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.59 50.0 3.21e-01 100.0% 27.8%
2075049 3787.1.1.0 ↗ alpha bundles › HAD superfamily helical bundle insertion domain 0.55 41.0 3.97e-01 83.3% 94.2%
4474912 377.4.1.1 ↗ few secondary structure elements › Glucocorticoid receptor-like › YlxR-like › YlxR-like › YlxR 0.55 42.0 3.94e-01 83.3% 92.2%
5001110 2006.1.1.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.54 42.0 3.03e-01 86.1% 35.7%
4653130 101.1.2.20 ↗ alpha arrays › HTH › HTH › winged helix domain › Arg_repressor 0.54 37.0 3.43e-01 72.2% 75.8%
4558680 101.1.2.807 ↗ alpha arrays › HTH › HTH › winged helix domain › MC6 0.53 36.0 3.55e-01 72.2% 83.7%
3812167 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.52 42.0 3.81e-01 88.9% 96.0%
5020986 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.52 38.0 2.57e-01 77.8% 93.0%
3577433 108.1.1.97 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.52 43.0 3.67e-01 94.4% 62.5%
3246909 101.1.2.73 ↗ alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82 0.51 38.0 3.55e-01 84.7% 94.0%
3737796 101.1.1.10 ↗ alpha arrays › HTH › HTH › Three-helical HTH › ARID 0.51 42.0 3.95e-01 94.4% 97.8%
D2 high residues 17-90
PDB
Domain cluster: representative
CATH (58)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2e9xA01 1.20.58.1030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.92 60.0 4.81e-01 78.4% 38.3%
4e6nA02 6.10.140.1010 Special › Helix non-globular › Helix Hairpins › 0.88 58.0 6.11e-01 78.4% 75.8%
1skvA00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.87 61.0 6.64e-01 78.4% 84.4%
3lssA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.83 60.0 5.08e-01 78.4% 49.1%
1ykhA00 6.10.140.200 Special › Helix non-globular › Helix Hairpins › 0.83 60.0 5.38e-01 78.4% 57.9%
4m7cB00 1.25.40.210 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Telomere repeat-binding factor, dimerisation domain 0.82 57.0 4.03e-01 74.3% 26.8%
1oaoC01 1.10.8.190 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Carbon monoxide dehydrogenase alpha subunit. Chain M, domain 1 0.80 70.0 5.89e-01 94.6% 74.2%
1gaxA05 1.10.287.380 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain 0.80 60.0 6.09e-01 78.4% 79.5%
6cgaC02 1.20.58.860 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.80 52.0 5.16e-01 78.4% 64.1%
4wpeA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.79 58.0 3.80e-01 81.1% 20.4%
4i5sB03 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.79 56.0 5.57e-01 78.4% 72.0%
4abmD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.78 59.0 5.84e-01 78.4% 89.6%
4nb5B02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.78 59.0 6.30e-01 81.1% 90.6%
1lvfB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.76 57.0 5.05e-01 78.4% 56.7%
2yevC00 6.10.280.110 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.76 54.0 5.91e-01 74.3% 92.1%
4fxxB01 6.10.140.1790 Special › Helix non-globular › Helix Hairpins › 0.76 54.0 5.55e-01 74.3% 91.7%
6yttA01 1.10.8.190 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Carbon monoxide dehydrogenase alpha subunit. Chain M, domain 1 0.76 65.0 5.91e-01 94.6% 89.0%
2q0oC00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.75 56.0 5.30e-01 78.4% 67.4%
4nsmA00 6.10.250.2770 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.75 54.0 5.56e-01 75.7% 98.6%
3jrtA00 1.20.120.1060 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.74 55.0 4.16e-01 78.4% 39.8%
2lw1A00 1.10.287.380 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain 0.73 56.0 5.36e-01 81.1% 70.6%
3hr0B01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.72 56.0 5.46e-01 81.1% 77.2%
1avoB00 1.20.120.180 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Proteasome activator pa28, C-terminal domain 0.72 64.0 5.07e-01 94.6% 78.6%
4i0xG00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.72 53.0 5.58e-01 78.4% 88.2%
3layF00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.70 52.0 5.11e-01 77.0% 74.4%
1egdA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.70 62.0 5.03e-01 100.0% 89.4%
3swhA01 1.10.357.50 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › 0.69 53.0 4.04e-01 81.1% 38.2%
1b5lA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.69 60.0 4.65e-01 93.2% 65.1%
1dkxA02 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.69 54.0 5.32e-01 94.6% 77.5%
1tj7A01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.68 55.0 4.87e-01 95.9% 61.0%
7ymiZ01 1.10.287.740 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre 0.68 50.0 5.45e-01 78.4% 100.0%
1u5pA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.67 48.0 4.26e-01 78.4% 51.9%
3d2eA06 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.67 54.0 4.71e-01 94.6% 58.4%
2cazD00 6.10.140.820 Special › Helix non-globular › Helix Hairpins › 0.66 47.0 5.11e-01 77.0% 93.3%
3rguB00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.66 54.0 5.21e-01 93.2% 81.6%
1ij5A01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.65 47.0 4.68e-01 77.0% 75.0%
4kjmA02 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.64 40.0 4.48e-01 94.6% 85.5%
3qo8A01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.64 46.0 4.17e-01 78.4% 67.9%
3fhnA04 1.20.58.670 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dsl1p vesicle tethering complex, Tip20p subunit, domain D 0.64 43.0 3.54e-01 78.4% 39.7%
8cdaB03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.63 56.0 4.41e-01 100.0% 100.0%
4nuuB02 1.20.58.830 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.63 47.0 4.00e-01 79.7% 61.0%
1r0dA00 1.20.1410.10 Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain 0.63 55.0 4.13e-01 100.0% 64.8%
4aybA07 1.10.132.30 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › RNA polymerase Rpb1 funnel domain 0.63 48.0 4.06e-01 83.8% 50.0%
1br0A00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.63 45.0 3.90e-01 77.0% 47.5%
7dwqL01 1.20.1240.10 Mainly Alpha › Up-down Bundle › Photosystem 1 Reaction Centre Subunit Xi; Chain: L; › Photosystem I PsaL, reaction centre subunit XI 0.62 49.0 4.12e-01 85.1% 50.4%
2rldA00 1.20.1440.60 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence 0.61 53.0 4.60e-01 95.9% 93.0%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.61 47.0 4.01e-01 82.4% 51.3%
3h0gA05 1.10.132.30 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › RNA polymerase Rpb1 funnel domain 0.61 48.0 3.82e-01 86.5% 42.5%
2gshA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.60 42.0 3.25e-01 73.0% 92.6%
6qumQ00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.59 46.0 4.70e-01 85.1% 98.6%
1jalA03 1.10.150.300 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Obg-related GTPase Ych/YyaF, coiled-coil domain 0.57 48.0 4.67e-01 93.2% 93.8%
2hfiA00 1.20.120.440 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like 0.57 42.0 3.58e-01 78.4% 48.0%
3ic9A02 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.54 40.0 4.13e-01 89.2% 84.3%
2o5iN07 1.10.132.30 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › RNA polymerase Rpb1 funnel domain 0.54 46.0 3.97e-01 94.6% 61.2%
3jr7A01 3.40.50.10440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 0.51 41.0 3.49e-01 86.5% 91.5%
1vi0A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.51 40.0 3.26e-01 86.5% 70.3%
3e9eB00 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.50 38.0 2.75e-01 85.1% 96.2%
4x9xA01 3.40.50.10170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.50 40.0 3.18e-01 86.5% 95.3%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2636640 192.15.1.3 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Vps23_core 0.86 57.0 5.69e-01 78.4% 66.2%
3355246 192.1.1.0 ↗ alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain 0.85 56.0 5.45e-01 77.0% 62.5%
1927453 3615.1.1.0 ↗ alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain 0.83 56.0 5.89e-01 78.4% 77.3%
5029847 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.82 59.0 5.94e-01 78.4% 73.3%
4938100 4323.1.1.0 ↗ alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C 0.81 61.0 4.68e-01 78.4% 43.3%
4234530 192.7.1.2 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.81 61.0 5.13e-01 78.4% 50.4%
5082442 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.81 61.0 4.90e-01 78.4% 76.9%
3838987 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.80 61.0 4.25e-01 78.4% 32.5%
4072921 192.5.1.20 ↗ alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › Val_tRNA-synt_C 0.80 61.0 6.30e-01 78.4% 84.1%
4018180 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.79 57.0 3.80e-01 78.4% 21.6%
4299170 192.7.1.4 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Val_tRNA-synt_C 0.79 59.0 6.15e-01 78.4% 82.9%
3885007 3922.1.1.67 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Val_tRNA-synt_C 0.79 59.0 6.13e-01 78.4% 82.9%
4132296 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.78 59.0 6.52e-01 78.4% 96.7%
3723174 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.78 59.0 5.90e-01 78.4% 86.7%
4013585 192.7.1.0 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.78 59.0 6.06e-01 78.4% 82.9%
3708367 192.7.1.4 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Val_tRNA-synt_C 0.78 59.0 6.05e-01 78.4% 82.9%
3609051 3748.1.1.0 ↗ extended segments › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain 0.77 58.0 5.52e-01 78.4% 75.3%
3595063 192.8.1.343 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Val_tRNA-synt_C 0.77 58.0 6.21e-01 78.4% 89.2%
3787585 5086.1.1.87 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › ING 0.77 58.0 5.05e-01 78.4% 57.1%
3609066 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.77 56.0 4.72e-01 75.7% 60.9%
3186805 3922.1.1.0 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.77 58.0 5.96e-01 78.4% 82.9%
3489764 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.76 51.0 4.50e-01 78.4% 48.6%
5017743 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.74 53.0 5.06e-01 78.4% 64.7%
4660205 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.74 56.0 4.49e-01 78.4% 56.3%
3390358 5000.4.1.8 ↗ alpha arrays › Toxins' membrane translocation domains › delta-Endotoxin (insectocide), N-terminal domain › delta-Endotoxin (insectocide), N-terminal domain › AC_N 0.74 68.0 4.14e-01 100.0% 29.5%
3210751 5086.1.1.180 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › DUF3435 0.73 54.0 4.74e-01 77.0% 54.3%
3563979 174.1.1.1 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin 0.71 58.0 4.61e-01 87.8% 74.5%
3687276 150.5.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.71 61.0 5.82e-01 93.2% 100.0%
3514909 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.70 64.0 4.10e-01 95.9% 31.0%
5006936 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.70 52.0 5.50e-01 78.4% 100.0%
4954786 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.69 51.0 4.89e-01 78.4% 82.4%
3464778 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.68 38.0 3.67e-01 95.9% 48.2%
4927356 192.15.1.0 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.68 60.0 5.34e-01 97.3% 78.1%
3788423 604.1.1.132 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › KAR9 0.68 50.0 4.44e-01 78.4% 56.2%
3590473 4323.1.1.0 ↗ alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C 0.68 49.0 3.81e-01 78.4% 34.1%
3945539 4168.1.1.1 ↗ alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain › HAMP 0.66 36.0 3.96e-01 70.3% 65.0%
5028612 4958.1.1.4 ↗ a+b complex topology › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_5 0.65 49.0 3.48e-01 85.1% 26.8%
3960011 150.8.1.2 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE › EspB_PPE 0.65 48.0 3.74e-01 81.1% 36.3%
4934657 4323.1.1.0 ↗ alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C 0.65 48.0 3.78e-01 81.1% 36.4%
3509614 3959.1.1.1 ↗ alpha duplicates or obligate multimers › Protein Hikeshi dimerization domain › Protein Hikeshi dimerization domain › Protein Hikeshi dimerization domain › Hikeshi-like_C 0.64 51.0 5.47e-01 87.8% 100.0%
4943462 4958.1.1.4 ↗ a+b complex topology › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_5 0.64 48.0 3.37e-01 82.4% 25.7%
4408647 192.7.1.2 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.64 47.0 4.19e-01 78.4% 55.2%
5040892 5073.1.2.0 ↗ alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Copper efflux ATPase transmembrane domain 0.64 48.0 3.24e-01 82.4% 45.8%
1956188 3615.1.1.1 ↗ alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Fzo_mitofusin 0.64 48.0 4.82e-01 81.1% 82.2%
3504303 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.63 46.0 4.23e-01 78.4% 61.0%
3550353 3602.1.1.0 ↗ alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain 0.63 46.0 4.82e-01 78.4% 89.2%
4949113 4958.1.1.4 ↗ a+b complex topology › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_5 0.63 48.0 3.95e-01 83.8% 44.8%
3784119 4958.1.1.1 ↗ a+b complex topology › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 0.63 48.0 3.06e-01 82.4% 17.1%
4352674 632.1.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain 0.62 52.0 4.67e-01 93.2% 67.6%
4952853 5058.1.1.2 ↗ alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st 0.62 48.0 4.38e-01 83.8% 63.2%
3981640 5058.1.1.2 ↗ alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st 0.62 48.0 4.55e-01 83.8% 70.0%
3490268 148.1.3.13 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_9 0.61 45.0 3.00e-01 81.1% 18.5%
4095048 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.61 52.0 4.49e-01 95.9% 60.8%
3264876 604.12.1.42 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › DUF202 0.61 45.0 4.09e-01 78.4% 64.0%
3214018 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.59 50.0 4.63e-01 94.6% 76.8%
3899802 621.1.1.8 ↗ alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › GVIN1 0.59 42.0 3.73e-01 87.8% 50.9%
1308653 159.1.4.1 ↗ alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Type II deoxyuridine triphosphatase-related › dUTPase_2 0.59 43.0 3.94e-01 78.4% 59.2%
3927398 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.58 40.0 3.57e-01 100.0% 50.5%
4951651 5042.1.1.1 ↗ extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › CorA 0.56 40.0 4.17e-01 77.0% 95.6%
3270180 5063.1.1.0 ↗ alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK 0.54 43.0 4.00e-01 100.0% 70.0%
3331225 5042.1.1.0 ↗ extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region 0.50 40.0 4.16e-01 87.8% 92.9%