NC_049340.1__YP_009873817.1__HYO65_gp133__00133

Bact-Vir

Identity

89.7 mean pLDDT

Heunggongvirae› Uroviricota› Caudoviricetes› Shirahamavirus› Tenacibaculum_phage_PTm1

TaxID: 2547425

View cluster (2 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-83

PDB

Domain cluster: representative

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2jxtA01	3.10.20.10	Alpha Beta › Roll › Ubiquitin-like (UB roll) ›	0.62	44.0	4.46e-01	98.7%	76.3%
2qsdA01	3.10.20.10	Alpha Beta › Roll › Ubiquitin-like (UB roll) ›	0.59	42.0	4.37e-01	97.4%	85.1%
2zw2A00	3.30.1280.10	Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS	0.54	45.0	4.41e-01	96.1%	98.8%
1viuC00	3.90.79.10	Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase	0.53	45.0	3.58e-01	100.0%	71.8%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5081134	3986.2.1.0 ↗	a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd	0.67	44.0	4.76e-01	93.4%	85.0%
3216210	3115.1.1.0 ↗	a+b two layers › GP2-like › RplX-like › RplX-like	0.66	41.0	4.77e-01	94.7%	94.0%
4937773	3115.1.1.1 ↗	a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A	0.62	45.0	5.02e-01	92.1%	100.0%
4013514	3115.1.1.0 ↗	a+b two layers › GP2-like › RplX-like › RplX-like	0.60	47.0	4.23e-01	97.4%	61.9%
3633743	2004.1.1.36 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynamin_N	0.57	45.0	3.02e-01	98.7%	20.3%
4969863	3115.1.1.1 ↗	a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A	0.56	43.0	4.36e-01	98.7%	84.0%
3669363	11.1.1.389 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › EDR2_C	0.54	46.0	3.95e-01	100.0%	83.1%
3397051	210.2.1.1 ↗	a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C	0.51	43.0	2.79e-01	100.0%	89.5%

D2 high residues 118-186

PDB

Domain cluster: representative

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2z0rA00	3.40.1350.90	Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › Uncharacterised protein PF11572, DUF3234	0.56	45.0	4.04e-01	89.9%	94.8%
3obfA00	3.30.450.40	Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain	0.55	39.0	3.03e-01	78.3%	79.0%
3jc6C00	1.20.58.2050	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.54	38.0	3.02e-01	76.8%	35.8%
3nyiB01	3.40.50.10170	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.53	38.0	3.01e-01	78.3%	87.9%
1ry6A00	3.40.850.10	Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain	0.52	43.0	2.87e-01	95.7%	37.0%
3dxiA00	3.20.20.70	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I	0.51	38.0	2.61e-01	84.1%	73.6%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3264544	904.1.1.1 ↗	few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box	0.64	43.0	4.54e-01	97.1%	81.7%
3197476	10.32.1.42 ↗	beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PINIT	0.52	36.0	2.97e-01	75.4%	70.0%
4007792	10.12.1.115 ↗	beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PF30437	0.50	41.0	3.39e-01	94.2%	49.6%