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NC_049340.1__YP_009873829.1__HYO65_gp145__00145
Bact-VirNC_049340.1__YP_009873829.1__HYO65_gp145__00145
Identity
- Accession:
- NC_049340 ↗
- Kingdom:
- phage
Quality
69.1
mean pLDDT
Taxonomy
TaxID: 2547425
Cluster
View cluster (11 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 26-142
Domain cluster:
rep: qs_7_scaffold_0_curated_closed_complete_prodigal-single.1__X__X__00207__D32-129
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7vd7A01 | 3.10.450.530 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system | 0.65 | 48.0 | 5.31e-01 | 99.1% | 97.8% |
| 3qwnD01 | 2.40.50.500 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain | 0.64 | 28.0 | 3.47e-01 | 89.7% | 64.3% |
| 6n90A00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.63 | 46.0 | 5.19e-01 | 91.5% | 100.0% |
| 1jt8A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 30.0 | 3.25e-01 | 100.0% | 51.0% |
| 2o1uB01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.54 | 31.0 | 2.83e-01 | 74.4% | 38.8% |
| 2f20A00 | 3.90.1680.10 | Alpha Beta › Alpha-Beta Complex › hypothetical protein yedk fold › SOS response associated peptidase-like | 0.53 | 39.0 | 3.19e-01 | 77.8% | 80.7% |
| 2krtA01 | 3.10.450.270 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 36.0 | 3.78e-01 | 71.8% | 86.4% |
| 1pguA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 37.0 | 2.68e-01 | 74.4% | 39.5% |
| 3agrA02 | 3.30.420.540 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.50 | 37.0 | 2.66e-01 | 77.8% | 71.2% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5061264 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.69 | 46.0 | 5.46e-01 | 88.9% | 100.0% |
| 4600925 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 31.0 | 3.47e-01 | 88.9% | 51.6% |
| 4240090 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.62 | 30.0 | 3.23e-01 | 89.7% | 51.0% |
| 5021435 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.60 | 52.0 | 5.32e-01 | 94.9% | 97.4% |
| 4971784 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.57 | 38.0 | 4.47e-01 | 99.1% | 100.0% |
| None | — | 0.55 | 36.0 | 2.71e-01 | 96.6% | 26.9% | |
| 3366531 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.55 | 27.0 | 3.54e-01 | 88.9% | 90.0% |
| 4977282 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.54 | 30.0 | 2.71e-01 | 88.0% | 36.9% |
| 3435879 | 2484.1.1.11 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ribosomal_L18p | 0.54 | 37.0 | 3.49e-01 | 70.9% | 75.0% |
| 3546198 | 5.1.4.149 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WDR54 | 0.53 | 37.0 | 2.65e-01 | 100.0% | 25.1% |
| 4292696 | 4263.2.1.0 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain | 0.53 | 33.0 | 3.97e-01 | 94.9% | 98.7% |
| 3843423 | 2484.5.1.3 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH_2 | 0.53 | 37.0 | 3.59e-01 | 94.9% | 65.4% |
| 3616263 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.51 | 34.0 | 3.64e-01 | 88.0% | 78.0% |
| 3561019 | 2484.5.1.3 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH_2 | 0.51 | 36.0 | 3.47e-01 | 94.0% | 64.6% |