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NC_049340.1__YP_009873871.1__HYO65_gp187__00187
Bact-VirNC_049340.1__YP_009873871.1__HYO65_gp187__00187
Identity
- Accession:
- NC_049340 ↗
- Kingdom:
- phage
Quality
77.8
mean pLDDT
Taxonomy
TaxID: 2547425
Cluster
View cluster (14 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 26-55_371-396_449-608
D2
medium
residues 56-161_344-370
Domain cluster:
rep: Filtrate_w_scaffold_3_prodigal-single.1__X__X__00009__D259-409
D3
medium
residues 162-175_243-343
Domain cluster:
rep: subassembly_31bins_VIRSorter_scaffold_0-circular-cat_2_SIZE_382860bp_prodigal-single.1__X__X__00397__D813-947
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2dchX01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.81 | 53.0 | 5.93e-01 | 79.1% | 82.8% |
| 7qssA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.81 | 63.0 | 5.23e-01 | 80.9% | 98.4% |
| 1dq3A04 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.80 | 54.0 | 5.46e-01 | 77.4% | 69.3% |
| 1ef0B02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.78 | 61.0 | 5.03e-01 | 80.9% | 83.0% |
| 3hyiA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.75 | 56.0 | 4.66e-01 | 77.4% | 78.0% |
| 3evzA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.64 | 40.0 | 3.49e-01 | 70.4% | 42.8% |
| 2bkyX00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.60 | 39.0 | 4.44e-01 | 70.4% | 88.4% |
| 3eeeA00 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.59 | 46.0 | 3.90e-01 | 81.7% | 56.4% |
| 2yxdA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 41.0 | 3.48e-01 | 71.3% | 52.0% |
| 6blkC00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.57 | 41.0 | 3.68e-01 | 73.9% | 87.3% |
| 1ug8A00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.57 | 39.0 | 4.37e-01 | 82.6% | 94.3% |
| 1hxdA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.53 | 37.0 | 3.13e-01 | 73.0% | 71.6% |
| 2pxxA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 38.0 | 3.15e-01 | 76.5% | 48.4% |
| 2lxrA00 | 3.30.110.40 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain | 0.52 | 32.0 | 3.72e-01 | 71.3% | 89.5% |
| 2bjnB00 | 3.30.1380.20 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 | 0.52 | 40.0 | 3.66e-01 | 80.9% | 68.9% |
| 5cvdB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 38.0 | 3.06e-01 | 78.3% | 99.1% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5046395 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.88 | 55.0 | 6.79e-01 | 75.7% | 97.3% |
| 4113237 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.87 | 58.0 | 6.38e-01 | 78.3% | 82.1% |
| 4683313 | 242.1.1.5 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N | 0.86 | 60.0 | 5.90e-01 | 70.4% | 70.0% |
| 4629783 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.86 | 61.0 | 6.02e-01 | 72.2% | 92.5% |
| 5023791 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.85 | 59.0 | 6.02e-01 | 70.4% | 74.5% |
| 4993734 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.84 | 66.0 | 5.21e-01 | 81.7% | 87.7% |
| 3282322 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.84 | 60.0 | 6.04e-01 | 78.3% | 73.0% |
| 4075546 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.84 | 60.0 | 6.77e-01 | 77.4% | 94.4% |
| 4669669 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.83 | 61.0 | 6.23e-01 | 81.7% | 78.2% |
| 4681936 | 242.1.1.5 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N | 0.83 | 57.0 | 5.76e-01 | 70.4% | 73.0% |
| 4993483 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.83 | 55.0 | 5.80e-01 | 78.3% | 74.3% |
| 4171346 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.83 | 60.0 | 5.96e-01 | 79.1% | 71.7% |
| 3603759 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.83 | 54.0 | 5.71e-01 | 72.2% | 73.3% |
| 5012959 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.82 | 56.0 | 5.81e-01 | 72.2% | 73.6% |
| 4941329 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.82 | 60.0 | 6.45e-01 | 79.1% | 87.0% |
| 3602142 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.81 | 58.0 | 6.04e-01 | 78.3% | 80.0% |
| 3950413 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.81 | 55.0 | 5.67e-01 | 77.4% | 72.7% |
| 5066391 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.80 | 63.0 | 5.87e-01 | 81.7% | 98.6% |
| 5028314 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.80 | 55.0 | 5.82e-01 | 78.3% | 77.1% |
| 5049212 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.80 | 55.0 | 4.70e-01 | 79.1% | 46.3% |
| 5028136 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.80 | 59.0 | 5.96e-01 | 77.4% | 76.5% |
| 4127810 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.79 | 59.0 | 5.84e-01 | 78.3% | 73.3% |
| 4993382 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.79 | 59.0 | 6.53e-01 | 77.4% | 96.8% |
| 5065934 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.79 | 50.0 | 5.84e-01 | 74.8% | 88.2% |
| 4943293 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.79 | 55.0 | 5.65e-01 | 72.2% | 74.5% |
| 4412539 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.78 | 63.0 | 5.39e-01 | 84.3% | 83.4% |
| 4939276 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.78 | 55.0 | 5.52e-01 | 78.3% | 72.2% |
| 5012702 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.77 | 57.0 | 5.73e-01 | 78.3% | 75.7% |
| 5078552 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.77 | 60.0 | 5.07e-01 | 80.0% | 80.0% |
| 3952678 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.77 | 57.0 | 6.45e-01 | 76.5% | 98.9% |
| 3955114 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.76 | 59.0 | 5.55e-01 | 80.9% | 97.8% |
| 4541172 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.76 | 59.0 | 5.63e-01 | 80.9% | 86.9% |
| 4933369 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.75 | 58.0 | 5.56e-01 | 80.0% | 72.3% |
| 4675939 | 242.1.1.6 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_WhiA | 0.75 | 53.0 | 5.32e-01 | 72.2% | 72.2% |
| 4993816 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.71 | 61.0 | 5.53e-01 | 89.6% | 80.0% |
| 4943245 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.68 | 49.0 | 4.68e-01 | 73.9% | 81.5% |
| 5015712 | 2003.1.5.54 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_10 | 0.65 | 41.0 | 3.08e-01 | 70.4% | 27.7% |
| 4993381 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.64 | 47.0 | 5.34e-01 | 75.7% | 98.9% |
| 4084747 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.63 | 60.0 | 4.21e-01 | 100.0% | 87.8% |
| 5012467 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.62 | 42.0 | 4.34e-01 | 72.2% | 71.8% |
| 3642333 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 42.0 | 3.59e-01 | 72.2% | 94.9% |
| 3708567 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.58 | 40.0 | 2.88e-01 | 79.1% | 24.2% |
| 3343069 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.57 | 41.0 | 4.15e-01 | 82.6% | 73.9% |
| 3371729 | 2003.1.5.154 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_29, Methyltransf_11 | 0.57 | 45.0 | 2.80e-01 | 81.7% | 91.3% |
| 3657448 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.56 | 43.0 | 4.10e-01 | 82.6% | 84.3% |
| 4026240 | 328.6.1.2 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC | 0.55 | 42.0 | 3.23e-01 | 80.9% | 97.0% |
D4
medium
residues 176-242
Domain cluster:
rep: SR-VP_4-6_scaffold_141_476970_prodigal-single.1__X__X__00304__D401-473
CATH (94)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1dfaA03 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.80 | 69.0 | 6.12e-01 | 95.5% | 87.4% |
| 7qssA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.79 | 66.0 | 4.66e-01 | 89.6% | 35.1% |
| 3hyiA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.77 | 70.0 | 4.97e-01 | 100.0% | 36.6% |
| 1b24A01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.77 | 68.0 | 6.10e-01 | 100.0% | 94.7% |
| 2dchX02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.76 | 67.0 | 5.69e-01 | 98.5% | 71.2% |
| 2cveA02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.76 | 54.0 | 5.49e-01 | 74.6% | 80.3% |
| 3tj8A02 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.75 | 55.0 | 5.31e-01 | 76.1% | 70.3% |
| 8dy9I01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.75 | 62.0 | 4.42e-01 | 92.5% | 35.0% |
| 1dq3A04 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.74 | 65.0 | 5.43e-01 | 98.5% | 71.1% |
| 2ex5A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.72 | 65.0 | 4.56e-01 | 100.0% | 44.4% |
| 4yhxA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.72 | 62.0 | 4.93e-01 | 98.5% | 63.1% |
| 2kl8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.71 | 50.0 | 4.61e-01 | 73.1% | 69.4% |
| 3pgvA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.70 | 55.0 | 4.85e-01 | 86.6% | 88.1% |
| 3tvzB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 47.0 | 3.71e-01 | 71.6% | 34.3% |
| 3c0wA02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.70 | 61.0 | 5.33e-01 | 100.0% | 77.7% |
| 2l48A00 | 3.30.70.2030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 50.0 | 4.66e-01 | 76.1% | 70.6% |
| 4lq0A02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.70 | 59.0 | 4.69e-01 | 98.5% | 59.9% |
| 2vs7A02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.70 | 61.0 | 5.85e-01 | 100.0% | 97.4% |
| 1af5A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.69 | 60.0 | 4.94e-01 | 98.5% | 68.3% |
| 4dw8A02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.69 | 55.0 | 4.72e-01 | 86.6% | 91.5% |
| 1yj7B01 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.69 | 49.0 | 4.84e-01 | 74.6% | 77.5% |
| 4ae5C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 47.0 | 3.58e-01 | 71.6% | 30.4% |
| 1nf2A02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.69 | 55.0 | 4.70e-01 | 86.6% | 86.8% |
| 6vudA02 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.68 | 55.0 | 5.30e-01 | 88.1% | 89.3% |
| 2gukA00 | 3.30.2190.10 | Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like | 0.67 | 56.0 | 4.70e-01 | 89.6% | 85.6% |
| 3mczA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.67 | 50.0 | 3.40e-01 | 80.6% | 66.3% |
| 3hz7A00 | 3.30.110.40 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain | 0.67 | 54.0 | 5.27e-01 | 88.1% | 80.8% |
| 1zhvA00 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.66 | 54.0 | 4.41e-01 | 92.5% | 94.0% |
| 2ebbA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.66 | 51.0 | 4.59e-01 | 85.1% | 74.0% |
| 5i2cB01 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.66 | 56.0 | 4.36e-01 | 94.0% | 100.0% |
| 1lxjA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 46.0 | 4.05e-01 | 74.6% | 56.3% |
| 2qsrA01 | 3.90.1150.50 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription-repair-coupling factor, D7 domain | 0.66 | 54.0 | 4.19e-01 | 92.5% | 49.0% |
| 2hf2B02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.66 | 50.0 | 4.38e-01 | 85.1% | 87.9% |
| 1kn6A00 | 3.30.70.850 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8, pro-domain | 0.66 | 46.0 | 4.53e-01 | 74.6% | 83.6% |
| 4v1al00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.66 | 55.0 | 4.42e-01 | 94.0% | 55.6% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.65 | 54.0 | 4.03e-01 | 91.0% | 50.3% |
| 3daoA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.65 | 51.0 | 4.38e-01 | 86.6% | 88.1% |
| 1rkqA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.65 | 51.0 | 4.39e-01 | 86.6% | 88.8% |
| 5gt8D02 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.65 | 49.0 | 4.09e-01 | 83.6% | 96.7% |
| 3mpoA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.65 | 50.0 | 4.38e-01 | 86.6% | 88.8% |
| 3zxoA00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.64 | 51.0 | 4.25e-01 | 89.6% | 65.6% |
| 1x60A01 | 3.30.70.1070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat | 0.64 | 46.0 | 4.51e-01 | 76.1% | 90.3% |
| 2y8yA01 | 3.30.70.1200 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 1 | 0.64 | 45.0 | 4.18e-01 | 74.6% | 93.0% |
| 1zvpD00 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.64 | 53.0 | 4.31e-01 | 94.0% | 88.5% |
| 2pcrA02 | 3.40.190.80 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › | 0.64 | 46.0 | 3.90e-01 | 77.6% | 80.0% |
| 1s2oA02 | 3.90.1070.10 | Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › | 0.64 | 49.0 | 4.82e-01 | 85.1% | 88.7% |
| 5mmjh01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.63 | 52.0 | 4.99e-01 | 88.1% | 78.7% |
| 4iw7A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.63 | 49.0 | 4.24e-01 | 89.6% | 60.0% |
| 1js3A03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.63 | 50.0 | 4.45e-01 | 88.1% | 76.3% |
| 1lfwA03 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 50.0 | 4.61e-01 | 89.6% | 95.5% |
| 4feiA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 49.0 | 4.22e-01 | 83.6% | 86.3% |
| 2ln3A00 | 3.30.110.140 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › | 0.62 | 49.0 | 4.63e-01 | 86.6% | 74.7% |
| 2b25A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 47.0 | 3.51e-01 | 83.6% | 79.7% |
| 2dt9A01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 49.0 | 4.78e-01 | 88.1% | 85.1% |
| 4e1oA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.62 | 49.0 | 4.38e-01 | 88.1% | 75.5% |
| 2if1A00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.62 | 48.0 | 4.02e-01 | 88.1% | 64.3% |
| 3mtjA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 42.0 | 4.12e-01 | 71.6% | 71.1% |
| 5idmA00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.61 | 48.0 | 3.64e-01 | 88.1% | 67.2% |
| 3akjA01 | 3.30.200.120 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.61 | 45.0 | 4.44e-01 | 82.1% | 81.1% |
| 2pt7G02 | 3.30.1370.180 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.61 | 47.0 | 4.76e-01 | 85.1% | 86.6% |
| 2anrA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.61 | 42.0 | 4.14e-01 | 74.6% | 80.0% |
| 2lrrA00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.60 | 47.0 | 4.72e-01 | 86.6% | 82.9% |
| 8b6jb01 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.60 | 48.0 | 3.48e-01 | 89.6% | 94.1% |
| 3douA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 47.0 | 3.53e-01 | 86.6% | 34.9% |
| 4ymhD00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 44.0 | 3.02e-01 | 76.1% | 43.2% |
| 3htnB00 | 3.30.1330.80 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 | 0.60 | 45.0 | 3.59e-01 | 82.1% | 84.2% |
| 4i68A00 | 3.30.70.1800 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 42.0 | 3.85e-01 | 74.6% | 66.7% |
| 4r3aA02 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.59 | 46.0 | 3.74e-01 | 89.6% | 68.3% |
| 3kd4A01 | 2.60.40.3140 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 46.0 | 3.25e-01 | 85.1% | 90.9% |
| 2pjdA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 48.0 | 3.70e-01 | 92.5% | 84.0% |
| 1xxaC00 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.58 | 49.0 | 4.81e-01 | 94.0% | 93.2% |
| 3ntvA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 43.0 | 3.06e-01 | 79.1% | 46.7% |
| 3d7aA01 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.57 | 40.0 | 3.35e-01 | 77.6% | 72.8% |
| 3jz3B01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.57 | 43.0 | 3.45e-01 | 85.1% | 48.0% |
| 1r62A00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.57 | 45.0 | 3.65e-01 | 89.6% | 94.9% |
| 3zieD00 | 3.30.110.150 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein | 0.56 | 44.0 | 4.17e-01 | 88.1% | 75.6% |
| 3hr6A02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 47.0 | 3.63e-01 | 95.5% | 96.8% |
| 2g47A03 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.55 | 42.0 | 3.05e-01 | 88.1% | 86.8% |
| 4qpkB02 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.55 | 41.0 | 3.43e-01 | 85.1% | 71.6% |
| 2ctfA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.54 | 38.0 | 3.42e-01 | 76.1% | 59.8% |
| 2fswA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 45.0 | 4.03e-01 | 100.0% | 73.5% |
| 1ub9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 45.0 | 4.08e-01 | 100.0% | 80.0% |
| 1ewqB01 | 3.40.1170.10 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › DNA repair protein MutS, domain I | 0.53 | 44.0 | 3.76e-01 | 98.5% | 72.9% |
| 1sfxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 42.0 | 3.69e-01 | 89.6% | 59.6% |
| 2mlgA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 40.0 | 3.91e-01 | 86.6% | 80.5% |
| 3r0aA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 40.0 | 3.48e-01 | 89.6% | 55.0% |
| 3elkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 44.0 | 3.89e-01 | 100.0% | 79.0% |
| 5hs7B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 44.0 | 4.00e-01 | 100.0% | 81.6% |
| 3m8eA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 44.0 | 3.96e-01 | 100.0% | 81.2% |
| 2lfvA00 | 3.30.70.1070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat | 0.52 | 36.0 | 3.28e-01 | 77.6% | 64.2% |
| 4ejoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 42.0 | 3.69e-01 | 98.5% | 73.2% |
| 3l7wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 42.0 | 3.75e-01 | 100.0% | 75.2% |
| 3l9fA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 42.0 | 3.92e-01 | 100.0% | 92.1% |
| 2avdA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 41.0 | 2.97e-01 | 95.5% | 84.5% |
ECOD (99)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5028300 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.87 | 79.0 | 7.15e-01 | 95.5% | 80.0% |
| 3602137 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.86 | 77.0 | 6.79e-01 | 97.0% | 91.6% |
| 4654074 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.85 | 61.0 | 5.42e-01 | 74.6% | 61.1% |
| 5032405 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.84 | 75.0 | 6.74e-01 | 97.0% | 81.1% |
| 4978366 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.83 | 63.0 | 6.20e-01 | 85.1% | 77.1% |
| 4978474 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.82 | 75.0 | 5.84e-01 | 98.5% | 50.4% |
| 4999898 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.81 | 73.0 | 6.56e-01 | 98.5% | 88.9% |
| 4937054 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.81 | 73.0 | 6.22e-01 | 98.5% | 78.1% |
| 4996402 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.80 | 75.0 | 6.55e-01 | 100.0% | 77.9% |
| 5012958 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.79 | 68.0 | 5.41e-01 | 94.0% | 55.4% |
| 4559752 | 242.1.1.6 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_WhiA | 0.79 | 67.0 | 6.04e-01 | 92.5% | 78.9% |
| 3952678 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.79 | 63.0 | 5.70e-01 | 86.6% | 85.6% |
| 5028488 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.79 | 70.0 | 6.03e-01 | 98.5% | 78.1% |
| 4997777 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.79 | 68.0 | 6.32e-01 | 97.0% | 85.9% |
| 4288172 | 242.1.1.6 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_WhiA | 0.79 | 66.0 | 5.30e-01 | 92.5% | 54.6% |
| 3602223 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.79 | 71.0 | 6.24e-01 | 98.5% | 74.7% |
| 4993809 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.79 | 70.0 | 6.11e-01 | 98.5% | 74.0% |
| 5046394 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.78 | 68.0 | 6.23e-01 | 98.5% | 86.7% |
| 5078855 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.78 | 55.0 | 5.27e-01 | 73.1% | 69.3% |
| 4943246 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.78 | 70.0 | 6.06e-01 | 98.5% | 74.0% |
| 4986894 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.78 | 58.0 | 6.09e-01 | 79.1% | 88.3% |
| 4979525 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.78 | 69.0 | 4.94e-01 | 100.0% | 43.1% |
| 4997606 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.78 | 70.0 | 5.25e-01 | 98.5% | 47.7% |
| 5029252 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.78 | 68.0 | 5.64e-01 | 98.5% | 69.2% |
| 4994374 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.78 | 68.0 | 5.63e-01 | 98.5% | 75.0% |
| 3603717 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.78 | 68.0 | 6.39e-01 | 95.5% | 91.3% |
| 3604140 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.77 | 68.0 | 4.89e-01 | 97.0% | 38.4% |
| 3950275 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.77 | 65.0 | 6.06e-01 | 95.5% | 91.8% |
| 5013026 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.77 | 66.0 | 4.90e-01 | 95.5% | 42.4% |
| 4971295 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.77 | 68.0 | 6.09e-01 | 100.0% | 85.3% |
| 5058449 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.76 | 67.0 | 5.61e-01 | 98.5% | 84.3% |
| 1159602 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.76 | 67.0 | 5.67e-01 | 98.5% | 70.5% |
| 4938255 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.76 | 68.0 | 6.44e-01 | 100.0% | 83.7% |
| 4992653 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.76 | 68.0 | 6.74e-01 | 98.5% | 98.6% |
| 5022297 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.76 | 68.0 | 6.03e-01 | 98.5% | 72.6% |
| 4200948 | 242.1.1.2 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 | 0.76 | 65.0 | 5.71e-01 | 95.5% | 77.0% |
| 4096150 | 242.1.1.6 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_WhiA | 0.76 | 63.0 | 5.17e-01 | 92.5% | 56.8% |
| 4978265 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.75 | 67.0 | 4.99e-01 | 97.0% | 41.9% |
| 5010185 | 328.5.1.0 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like | 0.75 | 59.0 | 5.88e-01 | 88.1% | 80.0% |
| 3386910 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.75 | 60.0 | 5.92e-01 | 88.1% | 81.4% |
| 4626502 | 242.1.1.6 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_WhiA | 0.75 | 62.0 | 5.07e-01 | 92.5% | 59.2% |
| 4997781 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.75 | 65.0 | 5.61e-01 | 98.5% | 76.2% |
| 4050037 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.74 | 65.0 | 5.71e-01 | 98.5% | 79.0% |
| 4217761 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.74 | 52.0 | 4.99e-01 | 74.6% | 69.6% |
| 3838308 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.74 | 54.0 | 5.46e-01 | 76.1% | 87.7% |
| 5023543 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.74 | 65.0 | 5.71e-01 | 98.5% | 72.0% |
| 3972855 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.73 | 51.0 | 4.96e-01 | 73.1% | 82.7% |
| 4464001 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.72 | 62.0 | 5.28e-01 | 98.5% | 74.8% |
| 4979624 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.72 | 61.0 | 5.22e-01 | 95.5% | 70.9% |
| 5012467 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.72 | 58.0 | 4.94e-01 | 88.1% | 59.1% |
| 5014006 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.72 | 58.0 | 5.31e-01 | 86.6% | 80.0% |
| 4509301 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.72 | 63.0 | 4.80e-01 | 100.0% | 75.0% |
| 4994004 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.72 | 58.0 | 5.63e-01 | 86.6% | 80.0% |
| 5060689 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.72 | 56.0 | 5.91e-01 | 85.1% | 93.3% |
| 4933638 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.71 | 62.0 | 4.90e-01 | 98.5% | 59.3% |
| 4419954 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.71 | 49.0 | 4.97e-01 | 71.6% | 93.8% |
| 4033306 | 2011.1.1.23 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › M20_dimer | 0.71 | 57.0 | 4.14e-01 | 91.0% | 56.4% |
| 4485008 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.70 | 56.0 | 4.13e-01 | 91.0% | 56.4% |
| 4956949 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.70 | 55.0 | 5.38e-01 | 88.1% | 77.0% |
| 4292464 | 327.19.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › DNA mismatch repair protein MutL regulatory subdomain › DNA mismatch repair protein MutL regulatory subdomain › MutL_C | 0.70 | 50.0 | 4.73e-01 | 76.1% | 73.8% |
| 4981701 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.69 | 54.0 | 5.47e-01 | 85.1% | 84.6% |
| 176932 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.68 | 55.0 | 4.01e-01 | 91.0% | 53.3% |
| 4997133 | 306.3.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 | 0.67 | 54.0 | 4.85e-01 | 89.6% | 68.4% |
| 4989805 | 328.5.1.0 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like | 0.67 | 51.0 | 5.08e-01 | 86.6% | 78.6% |
| 4479273 | 242.1.1.1 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 | 0.67 | 57.0 | 4.69e-01 | 98.5% | 72.3% |
| 3262749 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.67 | 54.0 | 4.65e-01 | 88.1% | 63.8% |
| 135569 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.67 | 54.0 | 5.25e-01 | 88.1% | 79.7% |
| 4968594 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.66 | 51.0 | 4.99e-01 | 86.6% | 82.7% |
| 3988437 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.66 | 52.0 | 3.89e-01 | 91.0% | 57.4% |
| 3407270 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.66 | 47.0 | 4.58e-01 | 76.1% | 82.7% |
| 3879109 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.66 | 54.0 | 4.64e-01 | 89.6% | 60.6% |
| 4361828 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.65 | 53.0 | 4.57e-01 | 89.6% | 60.0% |
| 3190610 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.65 | 51.0 | 4.36e-01 | 86.6% | 66.4% |
| 3343069 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.65 | 55.0 | 4.64e-01 | 95.5% | 79.1% |
| 3992039 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.64 | 52.0 | 4.63e-01 | 88.1% | 70.2% |
| 3357930 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.64 | 51.0 | 4.93e-01 | 86.6% | 77.3% |
| 3250910 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.63 | 50.0 | 5.00e-01 | 86.6% | 82.9% |
| 4228350 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.63 | 50.0 | 5.10e-01 | 86.6% | 89.2% |
| 3170274 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.63 | 50.0 | 4.52e-01 | 86.6% | 63.3% |
| 3926462 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.63 | 51.0 | 4.40e-01 | 88.1% | 60.0% |
| 3801312 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.63 | 49.0 | 4.54e-01 | 88.1% | 82.2% |
| 3198781 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.63 | 50.0 | 4.66e-01 | 88.1% | 75.3% |
| 4217176 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.63 | 49.0 | 4.39e-01 | 88.1% | 74.0% |
| 3740807 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.63 | 50.0 | 4.66e-01 | 88.1% | 72.9% |
| 3581967 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.62 | 49.0 | 4.98e-01 | 86.6% | 87.7% |
| 3403645 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.62 | 48.0 | 5.05e-01 | 86.6% | 95.0% |
| 4608678 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.62 | 49.0 | 4.69e-01 | 88.1% | 78.8% |
| 4987785 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.61 | 47.0 | 4.76e-01 | 85.1% | 92.3% |
| 3737985 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.61 | 49.0 | 4.32e-01 | 88.1% | 59.0% |
| 3500240 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.61 | 48.0 | 4.16e-01 | 88.1% | 66.4% |
| 3595328 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.61 | 48.0 | 4.20e-01 | 88.1% | 58.1% |
| 5066702 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.61 | 47.0 | 4.57e-01 | 86.6% | 84.0% |
| 4365938 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.60 | 49.0 | 4.53e-01 | 89.6% | 75.3% |
| 5042101 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.59 | 44.0 | 4.45e-01 | 85.1% | 90.0% |
| 3972097 | 304.14.1.0 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) | 0.59 | 43.0 | 4.15e-01 | 77.6% | 89.3% |
| 3781650 | 2003.6.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like | 0.59 | 49.0 | 3.16e-01 | 94.0% | 57.9% |
| 5013819 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.54 | 41.0 | 4.13e-01 | 86.6% | 93.8% |
| 3760983 | 3335.1.1.3 ↗ | beta barrels › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B › KCTD18_C | 0.54 | 39.0 | 3.53e-01 | 79.1% | 90.0% |
| 5048798 | 328.6.1.2 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC | 0.54 | 44.0 | 3.15e-01 | 100.0% | 85.9% |
D5
medium
residues 397-448
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vw4801 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.69 | 58.0 | 5.31e-01 | 100.0% | 87.7% |
| 1vkuA00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.66 | 56.0 | 4.84e-01 | 100.0% | 85.9% |
| 2ef8A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.65 | 55.0 | 4.78e-01 | 98.1% | 76.2% |
| 2dbgA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.61 | 48.0 | 4.01e-01 | 92.3% | 67.0% |
| 5cofA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.60 | 44.0 | 3.17e-01 | 82.7% | 64.0% |
| 4mndA02 | 1.20.120.1760 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain | 0.59 | 45.0 | 3.07e-01 | 84.6% | 52.9% |
| 3tjmA02 | 1.10.1470.20 | Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › Fatty acid synthase; domain 2 | 0.57 | 47.0 | 3.96e-01 | 96.2% | 52.2% |
| 6hqvA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 47.0 | 3.36e-01 | 100.0% | 84.0% |
| 3e0fA02 | 1.10.150.650 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.53 | 42.0 | 3.78e-01 | 96.2% | 62.2% |
| 2q0oA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 45.0 | 4.20e-01 | 98.1% | 91.0% |
| 3ps9A03 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.51 | 42.0 | 3.15e-01 | 98.1% | 88.7% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4998574 | 2002.1.1.99 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GHL10 | 0.69 | 57.0 | 3.45e-01 | 94.2% | 31.7% |
| 3576492 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.64 | 56.0 | 4.64e-01 | 98.1% | 61.1% |
| 3286565 | 2003.1.11.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › AdoHcyase | 0.61 | 43.0 | 2.53e-01 | 75.0% | 20.7% |
| 3844798 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.58 | 40.0 | 3.71e-01 | 80.8% | 54.3% |
| 3475712 | 1134.1.1.0 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain | 0.54 | 48.0 | 4.36e-01 | 100.0% | 77.1% |