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NC_049340.1__YP_009873907.1__HYO65_gp223__00223
Bact-VirNC_049340.1__YP_009873907.1__HYO65_gp223__00223
Identity
- Accession:
- NC_049340 ↗
- Kingdom:
- phage
Quality
91.7
mean pLDDT
Taxonomy
TaxID: 2547425
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-66
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09499.18 best | RE_ApaLI | 40.7 | 3.30e-10 | 64.1% | 33.3% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4mb7A02 | 1.10.8.50 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.65 | 47.0 | 3.56e-01 | 82.8% | 33.3% |
| 1h3oB00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.58 | 42.0 | 3.97e-01 | 75.0% | 64.9% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3989702 | 101.1.11.39 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RE_ApaLI | 0.91 | 68.0 | 7.28e-01 | 78.1% | 90.9% |
| 3200599 | 3343.1.1.2 ↗ | alpha complex topology › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › GCP_C_terminal,GCP_N_terminal | 0.68 | 47.0 | 2.67e-01 | 71.9% | 36.8% |
| 4003342 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 38.0 | 2.90e-01 | 75.0% | 29.6% |
| 4469924 | 101.1.2.293 ↗ | alpha arrays › HTH › HTH › winged helix domain › IncFII_repA | 0.58 | 47.0 | 3.17e-01 | 90.6% | 43.1% |