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NC_049343.1__YP_009949300.1__HYO68_gp44__00044

Bact-Vir

NC_049343.1__YP_009949300.1__HYO68_gp44__00044

Identity

Accession:
NC_049343 ↗
Kingdom:
phage

Quality

93.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Peduoviridae› Gemsvirus› Escherichia_phage_500465-2

TaxID: 2716352

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 35-120
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3awiA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.95 91.0 6.18e-01 100.0% 33.2%
1l9fA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.78 50.0 3.82e-01 95.3% 29.6%
1tzlA02 3.30.1920.50 Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › 0.57 33.0 3.75e-01 76.7% 79.0%
6vmsR00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.50 37.0 2.66e-01 79.1% 61.5%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4406501 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.98 68.0 4.68e-01 94.2% 25.4%
4207264 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.98 77.0 5.11e-01 95.3% 25.6%
4571489 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.97 73.0 4.50e-01 96.5% 17.1%
4670927 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.97 76.0 5.22e-01 95.3% 28.7%
3981713 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.97 92.0 6.21e-01 98.8% 32.1%
4043361 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.96 91.0 5.54e-01 97.7% 20.5%
4055971 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.96 92.0 5.67e-01 100.0% 21.7%
4297740 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.96 69.0 4.35e-01 95.3% 17.5%
4137901 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.96 92.0 6.07e-01 100.0% 30.0%
None — 0.96 92.0 5.66e-01 100.0% 22.0%
None — 0.95 92.0 5.64e-01 100.0% 22.0%
None — 0.95 70.0 4.41e-01 96.5% 18.1%
4450018 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.95 62.0 3.87e-01 93.0% 15.4%
3386519 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.95 91.0 5.71e-01 100.0% 23.6%
4474965 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.95 91.0 6.13e-01 100.0% 33.6%
4055803 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.94 90.0 5.51e-01 100.0% 21.2%
4348246 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.94 69.0 4.36e-01 97.7% 18.6%
4081720 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.94 68.0 4.28e-01 100.0% 18.0%
4651534 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.93 88.0 5.45e-01 98.8% 21.8%
4504655 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.93 85.0 5.26e-01 95.3% 21.0%
4309550 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.93 89.0 5.46e-01 100.0% 21.2%
4318553 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.92 62.0 4.16e-01 96.5% 21.4%
4543035 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.90 85.0 5.28e-01 100.0% 21.7%
4173879 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.90 83.0 5.12e-01 97.7% 20.7%
4439064 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.89 84.0 5.19e-01 100.0% 22.1%
None — 0.89 80.0 5.01e-01 95.3% 23.7%
4481339 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.89 84.0 5.67e-01 100.0% 32.0%
3965525 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.89 81.0 5.55e-01 96.5% 32.7%
None — 0.89 82.0 5.54e-01 100.0% 30.5%
4566136 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.89 79.0 5.29e-01 96.5% 27.9%
None — 0.88 81.0 5.56e-01 100.0% 31.7%
4886142 2003.1.2.12 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › DAO 0.87 80.0 4.98e-01 98.8% 21.9%
None — 0.87 77.0 5.27e-01 96.5% 30.6%
4313160 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.86 78.0 4.87e-01 100.0% 20.2%
4002698 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.84 55.0 4.21e-01 96.5% 32.6%