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NC_049345.1__YP_009874025.1__HYO70_gp33__00033
Bact-VirNC_049345.1__YP_009874025.1__HYO70_gp33__00033
Identity
- Accession:
- NC_049345 ↗
- Kingdom:
- phage
Quality
73.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Schitoviridae›
Plymouthvirus›
Roseovarius_Plymouth_podovirus_1
TaxID: 926474
Cluster
View cluster (13 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 23-158
Domain cluster:
rep: JQ067093.2__ALH23509.1__PaMx74_36__00036__D1104-1231
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00754.32 best | F5_F8_type_C | 38.7 | 1.40e-09 | 72.1% | 68.5% |
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2j1aA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.81 | 61.0 | 6.06e-01 | 77.2% | 75.2% |
| 1uctA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 32.0 | 3.85e-01 | 94.1% | 65.9% |
| 1bu8A02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.65 | 47.0 | 5.23e-01 | 100.0% | 98.1% |
| 4hd5A01 | 2.60.40.3760 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 36.0 | 4.13e-01 | 100.0% | 80.4% |
| 6ryvA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 28.0 | 3.82e-01 | 91.9% | 90.8% |
| 3ci0J02 | 2.10.70.20 | Mainly Beta › Ribbon › Complement Module; domain 1 › gspk-gspi-gspj complex like domains | 0.57 | 23.0 | 3.26e-01 | 87.5% | 88.0% |
| 3mepA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 40.0 | 3.68e-01 | 72.8% | 68.2% |
| 2uwaA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 42.0 | 3.39e-01 | 80.9% | 54.0% |
| 3kb5A00 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.54 | 41.0 | 3.67e-01 | 80.1% | 73.6% |
| 3d30A02 | 2.60.40.760 | Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain | 0.53 | 32.0 | 3.69e-01 | 92.6% | 84.0% |
| 5h4zA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.51 | 38.0 | 3.87e-01 | 100.0% | 82.2% |
| 1y7bA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 39.0 | 3.43e-01 | 82.4% | 65.1% |
| 3b7yA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.51 | 39.0 | 3.87e-01 | 93.4% | 77.8% |
| 6kxkB02 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.50 | 39.0 | 3.94e-01 | 99.3% | 83.7% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2324084 | 10.32.1.2 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C | 0.84 | 68.0 | 6.34e-01 | 84.6% | 73.3% |
| 3904915 | 10.32.1.105 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 | 0.84 | 80.0 | 7.29e-01 | 100.0% | 90.6% |
| 3699596 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.80 | 74.0 | 6.64e-01 | 100.0% | 97.3% |
| 3934331 | 10.32.1.105 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 | 0.77 | 73.0 | 6.84e-01 | 100.0% | 89.4% |
| 3594435 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.77 | 72.0 | 6.15e-01 | 100.0% | 95.2% |
| 3748879 | 10.32.1.105 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 | 0.76 | 71.0 | 6.86e-01 | 100.0% | 94.0% |
| 3675614 | 10.10.1.0 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.59 | 54.0 | 5.14e-01 | 100.0% | 96.9% |
| 3451480 | 10.10.1.1 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT | 0.59 | 54.0 | 5.32e-01 | 100.0% | 98.6% |
| 5067519 | 10.1.1.41 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › GH43_C2 | 0.59 | 43.0 | 3.90e-01 | 77.2% | 69.5% |
| 3404024 | 10.1.1.23 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Neuralized | 0.57 | 42.0 | 3.94e-01 | 76.5% | 74.7% |
| 1238188 | 5.1.3.154 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF30361 | 0.56 | 21.0 | 3.41e-01 | 88.2% | 95.7% |
| 5084037 | 10.1.1.22 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › DUF1349 | 0.56 | 43.0 | 3.73e-01 | 81.6% | 66.7% |
| 3962692 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 31.0 | 3.54e-01 | 76.5% | 72.0% |
D2
medium
residues 166-218