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NC_049379.1__YP_009876121.1__HYP06_gp002__00002
Bact-VirNC_049379.1__YP_009876121.1__HYP06_gp002__00002
Identity
- Accession:
- NC_049379 ↗
- Kingdom:
- phage
Quality
69.0
mean pLDDT
Taxonomy
TaxID: 1913109
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-21_33-80
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1bd3A00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 45.0 | 3.19e-01 | 81.8% | 78.6% |
| 1hwyA02 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.59 | 41.0 | 3.22e-01 | 72.7% | 67.1% |
| 1i9gA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 52.0 | 3.76e-01 | 98.5% | 72.3% |
| 4oaqA01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.59 | 45.0 | 3.22e-01 | 87.9% | 81.7% |
| 2b25A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 51.0 | 3.69e-01 | 98.5% | 75.3% |
| 6tqfA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 44.0 | 3.17e-01 | 87.9% | 80.4% |
| 2x3eA01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.56 | 43.0 | 3.29e-01 | 86.4% | 93.0% |
| 5tvwA01 | 3.40.50.11260 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 40.0 | 3.38e-01 | 78.8% | 52.6% |
| 2gq0B02 | 3.40.50.11260 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 38.0 | 3.48e-01 | 77.3% | 65.6% |
| 1ejdA01 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.53 | 45.0 | 3.28e-01 | 100.0% | 94.2% |
| 1y6zA02 | 3.40.50.11260 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 38.0 | 3.58e-01 | 78.8% | 69.8% |
| 6jebA01 | 3.30.379.10 | Alpha Beta › 2-Layer Sandwich › Chitobiase; domain 2 › Chitobiase/beta-hexosaminidase domain 2-like | 0.53 | 37.0 | 3.64e-01 | 89.4% | 66.7% |
| 3mt0A00 | 3.40.50.12370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 41.0 | 2.85e-01 | 93.9% | 98.2% |
| 3c26A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 42.0 | 2.92e-01 | 97.0% | 41.2% |
| 3h7mA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 42.0 | 3.88e-01 | 100.0% | 89.4% |
| 3jv7A01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.51 | 41.0 | 3.07e-01 | 100.0% | 94.2% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3487500 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.69 | 47.0 | 3.28e-01 | 72.7% | 37.6% |
| 3613187 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.58 | 46.0 | 3.12e-01 | 89.4% | 67.7% |
| 3601586 | 7516.1.1.40 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Stealth_CR2 | 0.56 | 48.0 | 3.09e-01 | 100.0% | 70.6% |
| 3957343 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.55 | 37.0 | 2.62e-01 | 72.7% | 28.0% |
| 4994790 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.54 | 46.0 | 4.17e-01 | 100.0% | 86.3% |
| 3179589 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.53 | 44.0 | 3.36e-01 | 100.0% | 91.3% |
| 3736076 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.52 | 43.0 | 3.33e-01 | 100.0% | 88.7% |
| 4062084 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.52 | 44.0 | 3.92e-01 | 98.5% | 84.0% |
| 4070632 | 3703.1.1.1 ↗ | a/b three-layered sandwiches › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain › HSP90 C-terminal a/b domain › HSP90 | 0.52 | 36.0 | 3.08e-01 | 78.8% | 64.6% |
| 4059755 | 7523.1.1.4 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_3 | 0.51 | 43.0 | 2.96e-01 | 100.0% | 33.1% |
| 4466452 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.51 | 43.0 | 3.27e-01 | 100.0% | 90.9% |