←Back to structures
NC_049384.1__YP_009876905.1__HYP11_gp001__00001
Bact-VirNC_049384.1__YP_009876905.1__HYP11_gp001__00001
Identity
- Accession:
- NC_049384 ↗
- Kingdom:
- phage
Quality
90.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Ackermannviridae›
Agtrevirus›
Enterobacter_phage_EspM4VN
TaxID: 2137745
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 17-124
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2f46A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.59 | 44.0 | 4.07e-01 | 79.6% | 61.3% |
| 4rk0A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 36.0 | 3.40e-01 | 95.4% | 50.7% |
| 1ii7A01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.55 | 45.0 | 3.52e-01 | 90.7% | 64.3% |
| 3khtA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 41.0 | 3.91e-01 | 81.5% | 67.4% |
| 2o55A00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.53 | 45.0 | 3.51e-01 | 95.4% | 72.4% |
| 1t3tA04 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.53 | 45.0 | 3.34e-01 | 99.1% | 77.4% |
| 2b0cA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.51 | 37.0 | 3.46e-01 | 95.4% | 60.9% |
| 7paxA01 | 3.40.1180.10 | Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like | 0.51 | 41.0 | 3.19e-01 | 90.7% | 81.1% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5077698 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.59 | 52.0 | 4.02e-01 | 100.0% | 92.0% |
| 4491503 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.57 | 37.0 | 3.70e-01 | 100.0% | 64.5% |
| 3305746 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.54 | 39.0 | 3.85e-01 | 78.7% | 69.5% |
| 3324940 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.53 | 32.0 | 3.65e-01 | 88.0% | 84.0% |
| 4997976 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.53 | 46.0 | 3.86e-01 | 100.0% | 55.0% |
| 4028273 | 300.1.1.8 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_2 | 0.53 | 40.0 | 3.50e-01 | 81.5% | 90.6% |
| 4826081 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.52 | 36.0 | 2.92e-01 | 71.3% | 35.8% |
| None | — | 0.52 | 42.0 | 3.49e-01 | 88.0% | 58.1% | |
| 5010840 | 2003.1.5.80 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_24 | 0.52 | 41.0 | 3.47e-01 | 99.1% | 48.9% |
| 4951556 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.52 | 38.0 | 3.79e-01 | 80.6% | 73.9% |
| 4992187 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.52 | 42.0 | 3.40e-01 | 99.1% | 46.3% |
| 4988739 | 281.1.1.2 ↗ | a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › ThiP_synth | 0.51 | 41.0 | 3.49e-01 | 88.9% | 89.2% |
| 3199401 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.51 | 38.0 | 3.84e-01 | 95.4% | 81.9% |
| 3670887 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.50 | 39.0 | 3.65e-01 | 84.3% | 72.9% |