Back to structures

NC_049401.1__YP_009878074.1__HYP28_gp47__00047

Bact-Vir

NC_049401.1__YP_009878074.1__HYP28_gp47__00047

Identity

Accession:
NC_049401 ↗
Kingdom:
phage

Quality

93.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-50
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3l8kA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.73 59.0 3.69e-01 86.7% 18.0%
4ymuD00 1.10.3720.10 Mainly Alpha › Orthogonal Bundle › MetI-like fold › MetI-like 0.72 62.0 3.96e-01 97.8% 98.6%
6pd1C02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.56 49.0 3.05e-01 95.6% 64.4%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3672155 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.87 62.0 4.02e-01 75.6% 18.9%
4880296 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.66 57.0 4.63e-01 100.0% 58.6%
3361070 2003.1.2.102 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3, Pyr_redox_2 0.62 51.0 3.00e-01 100.0% 79.0%
3987951 604.39.1.16 alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › ThiW 0.60 51.0 3.50e-01 95.6% 27.5%