NC_049432.1__YP_009880120.1__HYP59_gp37__00036

Bact-Vir

Identity

75.8 mean pLDDT

Heunggongvirae› Uroviricota› Caudoviricetes› Peduoviridae› Aresaunavirus› Ralstonia_phage_RsoM1USA

TaxID: 2991867

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 27-124

PDB

Domain cluster: representative

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01527.27 best	HTH_Tnp_1	59.6	4.00e-16	75.5%	86.7%
PF13384.13	HTH_23	36.1	5.80e-09	49.0%	88.0%
PF13518.13	HTH_28	29.0	1.20e-06	49.0%	84.6%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4yifF00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.51	35.0	3.25e-01	72.4%	69.2%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4945127	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.69	50.0	5.26e-01	85.7%	85.9%
3986553	101.1.1.13 ↗	alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1	0.68	57.0	5.74e-01	96.9%	92.0%
4982076	101.1.3.0 ↗	alpha arrays › HTH › HTH › tetra-helical, LuxR-like	0.59	41.0	3.69e-01	73.5%	54.3%
3983783	101.1.1.13 ↗	alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1	0.58	47.0	4.81e-01	93.9%	93.7%
3970884	101.1.1.13 ↗	alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1	0.57	44.0	4.50e-01	94.9%	85.3%
4973961	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.57	39.0	3.98e-01	70.4%	91.6%
4148347	101.1.1.26 ↗	alpha arrays › HTH › HTH › Three-helical HTH › UPF0122	0.56	40.0	3.99e-01	79.6%	71.2%
None	—		0.54	40.0	3.92e-01	79.6%	77.3%