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NC_049448.1__YP_009882444.1__HYP77_gp12__00012

Bact-Vir

NC_049448.1__YP_009882444.1__HYP77_gp12__00012

Identity

Accession:
NC_049448 ↗
Kingdom:
phage

Quality

94.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 200-346
PDB
Domain cluster: representative
D2 medium residues 7-199_347-372
PDB
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1fvuB00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.57 32.0 4.27e-01 91.3% 100.0%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 14.0 2.68e-01 93.2% 71.0%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.55 15.0 2.61e-01 93.2% 67.7%
1c3aA00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.52 32.0 4.08e-01 93.6% 100.0%
1jznA00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.52 32.0 4.05e-01 92.7% 100.0%
6juvB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 18.0 2.95e-01 74.0% 86.7%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2080140 209.1.2.1 a+b complex topology › C-type lectin-like › C-type lectin-like › Sulfatase-modifying factor-like › FGE-sulfatase 0.95 92.0 7.36e-01 98.6% 99.5%
5002641 209.1.2.0 a+b complex topology › C-type lectin-like › C-type lectin-like › Sulfatase-modifying factor-like 0.76 69.0 5.60e-01 93.2% 89.2%
4936908 209.1.2.1 a+b complex topology › C-type lectin-like › C-type lectin-like › Sulfatase-modifying factor-like › FGE-sulfatase 0.75 67.0 6.24e-01 92.2% 99.6%
3324925 1.1.11.0 beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain 0.54 16.0 2.74e-01 93.2% 75.4%
3820507 2.1.1.18 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM 0.52 20.0 2.97e-01 97.7% 80.0%
3257563 101.1.1.76 alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 0.52 23.0 3.37e-01 87.7% 93.7%
4958612 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.50 14.0 2.77e-01 91.8% 92.7%