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NC_049448.1__YP_009882445.1__HYP77_gp13__00013
Bact-VirNC_049448.1__YP_009882445.1__HYP77_gp13__00013
Identity
- Accession:
- NC_049448 ↗
- Kingdom:
- phage
Quality
84.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Peduoviridae›
Gegevirus›
Klebsiella_phage_ST437-OXA245phi4.1
TaxID: 2510486
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 136-218
D2
medium
residues 59-119
Domain cluster:
rep: MK863032.2__QEM41182.1__Zuri_89__00085__D160-218
CATH (66)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2re2A00 | 3.30.420.130 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain | 0.75 | 51.0 | 4.02e-01 | 70.5% | 40.7% |
| 1hp1A01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.71 | 49.0 | 3.07e-01 | 73.8% | 89.6% |
| 5h8yD02 | 3.30.413.10 | Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 | 0.68 | 59.0 | 4.04e-01 | 95.1% | 30.5% |
| 2pvzB01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.66 | 56.0 | 3.96e-01 | 100.0% | 51.9% |
| 3girA02 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.66 | 48.0 | 4.35e-01 | 82.0% | 57.0% |
| 6vbkA01 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.65 | 55.0 | 4.58e-01 | 96.7% | 82.0% |
| 1dcjA00 | 3.30.110.40 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain | 0.64 | 45.0 | 4.17e-01 | 75.4% | 87.7% |
| 3ttgA00 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.64 | 53.0 | 3.33e-01 | 93.4% | 74.5% |
| 3a8kA02 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.64 | 47.0 | 4.24e-01 | 80.3% | 58.0% |
| 1wsrA02 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.64 | 47.0 | 4.20e-01 | 80.3% | 57.1% |
| 1dl5A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.64 | 50.0 | 3.50e-01 | 91.8% | 26.4% |
| 3tfiA00 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.64 | 49.0 | 3.10e-01 | 88.5% | 48.5% |
| 1yx2A02 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.64 | 46.0 | 4.22e-01 | 80.3% | 57.0% |
| 1dymA00 | 2.70.100.10 | Mainly Beta › Distorted Sandwich › 1,4-Beta-D-Glucan Cellobiohydrolase I; Chain A › Glycoside hydrolase, family 7, domain | 0.64 | 53.0 | 3.21e-01 | 91.8% | 78.6% |
| 1qy9A02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.63 | 56.0 | 4.10e-01 | 100.0% | 49.1% |
| 1v5vA02 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.62 | 47.0 | 4.19e-01 | 85.2% | 56.5% |
| 3ib5A00 | 3.10.570.10 | Alpha Beta › Roll › sex pheromone staph- cam373 precursor fold › sex pheromone staph- cam373 precursor domain | 0.61 | 50.0 | 3.26e-01 | 100.0% | 40.4% |
| 2jq5A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 50.0 | 3.94e-01 | 90.2% | 96.9% |
| 1u6zA02 | 3.30.420.150 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 | 0.61 | 46.0 | 3.39e-01 | 95.1% | 29.1% |
| 1nr0A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.60 | 53.0 | 3.35e-01 | 98.4% | 25.2% |
| 1pj5A04 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.60 | 45.0 | 3.72e-01 | 85.2% | 63.3% |
| 3fgbA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 52.0 | 3.23e-01 | 98.4% | 28.4% |
| 4r8oA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.59 | 51.0 | 4.42e-01 | 100.0% | 71.4% |
| 4ozuA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 50.0 | 3.18e-01 | 98.4% | 79.8% |
| 2pm6D01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 51.0 | 3.34e-01 | 100.0% | 38.9% |
| 4r03A00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.59 | 51.0 | 4.26e-01 | 100.0% | 66.1% |
| 4paaA04 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.59 | 45.0 | 3.73e-01 | 86.9% | 65.0% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 47.0 | 4.39e-01 | 88.5% | 89.5% |
| 2gbsA00 | 3.10.590.10 | Alpha Beta › Roll › ph1033 like fold › ph1033 like domains | 0.58 | 48.0 | 3.83e-01 | 100.0% | 91.7% |
| 2b78A01 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.58 | 47.0 | 4.61e-01 | 91.8% | 97.0% |
| 1nrkA02 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.58 | 42.0 | 3.87e-01 | 83.6% | 56.3% |
| 3dsmA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 51.0 | 3.22e-01 | 98.4% | 25.4% |
| 3ow8C00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 46.0 | 2.95e-01 | 86.9% | 18.0% |
| 1t62B00 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.58 | 47.0 | 3.64e-01 | 100.0% | 79.8% |
| 4hz9B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 49.0 | 3.92e-01 | 95.1% | 96.7% |
| 1mdaH00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 48.0 | 3.03e-01 | 98.4% | 27.2% |
| 4jbcA01 | 3.30.70.1690 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 41.0 | 3.61e-01 | 78.7% | 76.3% |
| 3d8pB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 40.0 | 3.02e-01 | 73.8% | 51.9% |
| 2f2hA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.57 | 45.0 | 3.83e-01 | 91.8% | 58.7% |
| 6qk7A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 49.0 | 3.10e-01 | 100.0% | 31.8% |
| 4ywzB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.56 | 42.0 | 3.35e-01 | 86.9% | 45.9% |
| 4ghbA00 | 2.40.160.190 | Mainly Beta › Beta Barrel › Porin › | 0.56 | 48.0 | 3.16e-01 | 96.7% | 24.3% |
| 4p25D01 | 2.40.510.10 | Mainly Beta › Beta Barrel › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Positive stranded ssRNA viruses | 0.55 | 45.0 | 3.25e-01 | 93.4% | 95.9% |
| 2cy2A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 40.0 | 3.01e-01 | 80.3% | 48.9% |
| 3q0xA01 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.55 | 48.0 | 3.59e-01 | 100.0% | 81.9% |
| 1rypL00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.55 | 47.0 | 3.27e-01 | 98.4% | 92.5% |
| 4wu3A02 | 3.30.70.1690 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 39.0 | 3.62e-01 | 78.7% | 90.6% |
| 1pjxA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.55 | 47.0 | 2.99e-01 | 96.7% | 29.6% |
| 2ft0A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 41.0 | 2.83e-01 | 82.0% | 40.5% |
| 1y9wA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 36.0 | 3.19e-01 | 70.5% | 73.1% |
| 2gksB01 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.55 | 45.0 | 3.62e-01 | 100.0% | 92.9% |
| 2zw5A01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 42.0 | 3.16e-01 | 90.2% | 54.6% |
| 1lwuC01 | 3.90.215.10 | Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 | 0.53 | 43.0 | 3.32e-01 | 93.4% | 55.6% |
| 4nsxA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 46.0 | 2.99e-01 | 100.0% | 98.0% |
| 1k8kC00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 44.0 | 2.81e-01 | 100.0% | 29.7% |
| 3dtdD00 | 2.60.40.1880 | Mainly Beta › Sandwich › Immunoglobulin-like › Invasion associated locus B (IalB) protein | 0.53 | 45.0 | 3.51e-01 | 100.0% | 62.1% |
| 1eqnB01 | 3.90.980.10 | Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain | 0.53 | 44.0 | 3.60e-01 | 100.0% | 92.9% |
| 2i00A02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 43.0 | 3.17e-01 | 90.2% | 49.7% |
| 2py5A01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.52 | 38.0 | 2.80e-01 | 100.0% | 25.5% |
| 3ub1D02 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 45.0 | 3.71e-01 | 96.7% | 92.1% |
| 4gq1A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 44.0 | 2.81e-01 | 100.0% | 36.0% |
| 1itvA00 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.51 | 45.0 | 3.18e-01 | 100.0% | 93.8% |
| 4hadB02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.51 | 44.0 | 3.14e-01 | 98.4% | 69.2% |
| 5jozB02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 46.0 | 3.18e-01 | 100.0% | 51.8% |
| 2qkdA03 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.51 | 39.0 | 4.24e-01 | 91.8% | 98.0% |
| 3ei3A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 42.0 | 2.73e-01 | 100.0% | 36.0% |
ECOD (67)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3276550 | 4312.2.1.0 ↗ | a+b two layers › RelE-like › YaeB-like › YaeB-like | 0.70 | 53.0 | 4.57e-01 | 80.3% | 61.3% |
| 3928485 | 304.107.1.1 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › GCV_T | 0.67 | 53.0 | 3.45e-01 | 88.5% | 64.8% |
| 4943195 | 304.107.1.1 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › GCV_T | 0.67 | 52.0 | 3.41e-01 | 88.5% | 64.4% |
| 3472342 | 304.107.1.1 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › GCV_T | 0.67 | 49.0 | 4.02e-01 | 80.3% | 44.9% |
| None | — | 0.67 | 51.0 | 3.47e-01 | 83.6% | 93.7% | |
| 4480625 | 304.107.1.0 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain | 0.66 | 49.0 | 3.72e-01 | 85.2% | 32.9% |
| 3490910 | 304.107.1.1 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › GCV_T | 0.66 | 48.0 | 3.53e-01 | 80.3% | 29.7% |
| 2068689 | 304.107.1.1 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › GCV_T | 0.66 | 48.0 | 3.76e-01 | 82.0% | 35.3% |
| 2069038 | 304.107.1.1 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › GCV_T | 0.65 | 48.0 | 3.67e-01 | 80.3% | 35.1% |
| 3235708 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.65 | 50.0 | 4.35e-01 | 95.1% | 53.0% |
| 4013549 | 296.1.1.0 ↗ | a+b three layers › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 › Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 | 0.65 | 55.0 | 3.83e-01 | 95.1% | 30.2% |
| 4385298 | 3421.1.1.1 ↗ | a+b complex topology › Yos9 dimerization domain › Yos9 dimerization domain › Yos9 dimerization domain › Yos9_DD | 0.64 | 53.0 | 4.30e-01 | 95.1% | 74.4% |
| 2068472 | 304.107.1.1 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › GCV_T | 0.64 | 47.0 | 3.68e-01 | 80.3% | 36.7% |
| 2066759 | 304.107.1.1 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › GCV_T | 0.63 | 46.0 | 4.16e-01 | 80.3% | 57.3% |
| 9354 | 2003.1.5.4 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PCMT | 0.63 | 52.0 | 3.61e-01 | 98.4% | 26.8% |
| 2066755 | 304.107.1.1 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › GCV_T | 0.63 | 45.0 | 4.03e-01 | 80.3% | 52.2% |
| 3222713 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.63 | 48.0 | 4.20e-01 | 96.7% | 53.0% |
| 3624597 | 214.1.1.9 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7063 | 0.62 | 48.0 | 4.17e-01 | 95.1% | 53.0% |
| 4977365 | 304.107.1.1 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › GCV_T | 0.62 | 45.0 | 3.66e-01 | 80.3% | 40.8% |
| 1545847 | 5.1.4.50 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF4623 | 0.62 | 51.0 | 3.17e-01 | 91.8% | 45.0% |
| 4591781 | 2004.1.1.1117 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF2478 | 0.62 | 51.0 | 3.74e-01 | 100.0% | 33.5% |
| 5014898 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.62 | 54.0 | 3.22e-01 | 96.7% | 19.3% |
| 2068914 | 304.107.1.1 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › GCV_T | 0.61 | 44.0 | 3.44e-01 | 80.3% | 33.3% |
| 3167247 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.61 | 49.0 | 3.00e-01 | 86.9% | 14.9% |
| 3514681 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.61 | 47.0 | 4.80e-01 | 95.1% | 85.0% |
| 3907501 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.61 | 52.0 | 3.33e-01 | 96.7% | 35.6% |
| 3220873 | 214.1.1.9 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7063 | 0.61 | 46.0 | 4.06e-01 | 95.1% | 53.0% |
| 3625308 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.61 | 46.0 | 3.70e-01 | 93.4% | 40.8% |
| 4007747 | 3735.1.1.14 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › TEN_YD-shell | 0.60 | 52.0 | 2.84e-01 | 98.4% | 5.9% |
| 3753991 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.60 | 41.0 | 4.61e-01 | 75.4% | 97.8% |
| 3261384 | 12.5.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | 0.60 | 50.0 | 3.72e-01 | 93.4% | 85.3% |
| 3781393 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.60 | 51.0 | 4.65e-01 | 100.0% | 78.6% |
| 3218472 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.60 | 47.0 | 3.83e-01 | 98.4% | 44.0% |
| 3999963 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.60 | 47.0 | 3.73e-01 | 95.1% | 41.5% |
| 3407569 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.60 | 53.0 | 3.34e-01 | 100.0% | 32.2% |
| 3560459 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.59 | 41.0 | 4.58e-01 | 75.4% | 97.8% |
| 4943121 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.59 | 52.0 | 3.14e-01 | 98.4% | 17.4% |
| 4963130 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.59 | 51.0 | 3.05e-01 | 100.0% | 36.8% |
| 3994973 | 101.1.12.3 ↗ | alpha arrays › HTH › HTH › HTH motif inserted in other structures › SAS-6_N | 0.59 | 51.0 | 4.03e-01 | 98.4% | 94.6% |
| 3980302 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.59 | 48.0 | 3.59e-01 | 93.4% | 59.4% |
| 3995842 | 10.1.1.4 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin | 0.59 | 45.0 | 3.12e-01 | 98.4% | 25.8% |
| 4025460 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 52.0 | 3.26e-01 | 100.0% | 30.2% |
| 3934930 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.58 | 51.0 | 3.58e-01 | 100.0% | 34.0% |
| 2722572 | 3894.1.1.3 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfB_M | 0.58 | 51.0 | 3.98e-01 | 100.0% | 45.2% |
| 4039533 | 3321.1.1.1 ↗ | a+b two layers › Meander beta sheet domain in fatty acid synthase subunit beta › Meander beta sheet domain in fatty acid synthase subunit beta › Meander beta sheet domain in fatty acid synthase subunit beta › FAS_meander | 0.58 | 50.0 | 3.76e-01 | 100.0% | 69.4% |
| 3862816 | 391.1.2.1 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC | 0.57 | 42.0 | 4.15e-01 | 78.7% | 73.4% |
| 3506713 | 304.107.1.1 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › GCV_T | 0.57 | 44.0 | 2.98e-01 | 88.5% | 72.7% |
| 2038 | 4178.1.1.4 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › PF29281 | 0.57 | 45.0 | 3.84e-01 | 91.8% | 59.3% |
| None | — | 0.55 | 40.0 | 3.01e-01 | 80.3% | 48.9% | |
| 4132214 | 4178.1.1.4 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › PF29281 | 0.55 | 41.0 | 3.74e-01 | 83.6% | 68.2% |
| 11074 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.55 | 36.0 | 2.92e-01 | 70.5% | 54.3% |
| 3541344 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.55 | 38.0 | 4.09e-01 | 91.8% | 93.8% |
| 4062505 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.55 | 47.0 | 3.19e-01 | 100.0% | 39.2% |
| 4978913 | 1.1.9.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › UPF0113 | 0.54 | 45.0 | 4.40e-01 | 100.0% | 98.6% |
| 3259368 | 5.1.11.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed | 0.54 | 46.0 | 2.79e-01 | 98.4% | 20.2% |
| 369229 | 3535.1.1.1 ↗ | a+b two layers › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 › CamS | 0.54 | 40.0 | 3.42e-01 | 88.5% | 50.8% |
| 5048830 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.53 | 40.0 | 3.36e-01 | 90.2% | 47.2% |
| 3784090 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 43.0 | 2.72e-01 | 100.0% | 38.5% |
| 3514747 | 213.1.1.36 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_17 | 0.52 | 43.0 | 3.24e-01 | 91.8% | 52.0% |
| 2754696 | 5.1.5.3 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.52 | 43.0 | 2.85e-01 | 100.0% | 43.0% |
| 3074400 | 4023.1.1.0 ↗ | a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core | 0.52 | 45.0 | 3.91e-01 | 100.0% | 90.9% |
| 3625615 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.52 | 39.0 | 3.10e-01 | 86.9% | 56.6% |
| 3225583 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.51 | 39.0 | 3.20e-01 | 86.9% | 60.8% |
| 4995416 | 1.1.9.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › UPF0113 | 0.51 | 43.0 | 4.10e-01 | 100.0% | 96.0% |
| 3519316 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.50 | 41.0 | 3.15e-01 | 96.7% | 84.2% |
| 3352560 | 2484.1.1.110 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MULE | 0.50 | 37.0 | 2.53e-01 | 86.9% | 69.8% |
| 5063947 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.50 | 42.0 | 3.18e-01 | 96.7% | 50.0% |
D3
medium
residues 234-344_368-416
Domain cluster:
rep: OP807345.1__WBM89858.1__X__00015__D655-810
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1pbyA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.59 | 35.0 | 4.16e-01 | 83.7% | 86.8% |
| 2bngC00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 28.0 | 3.03e-01 | 80.6% | 59.3% |
| 1z24A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 35.0 | 3.35e-01 | 86.9% | 60.3% |
D4
medium
residues 345-367_417-576
Domain cluster:
rep: OP807345.1__WBM89858.1__X__00015__D811-992
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08757.18 best | CotH | 24.8 | 2.10e-05 | 67.8% | 20.2% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1tzdA00 | 3.30.470.160 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Inositol polyphosphate kinase | 0.53 | 46.0 | 4.24e-01 | 94.5% | 93.8% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4949295 | 206.1.1.25 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › CotH | 0.78 | 75.0 | 5.67e-01 | 100.0% | 57.7% |
| 1838840 | 206.1.1.25 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › CotH | 0.77 | 74.0 | 5.75e-01 | 100.0% | 57.5% |
| 4145813 | 206.1.1.25 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › CotH | 0.67 | 59.0 | 4.90e-01 | 100.0% | 55.7% |
| 3255568 | 206.1.1.7 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PI3_PI4_kinase | 0.59 | 50.0 | 4.09e-01 | 100.0% | 50.2% |
| 4810263 | 206.1.1.7 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PI3_PI4_kinase | 0.58 | 49.0 | 4.40e-01 | 100.0% | 65.9% |
| 3595581 | 206.1.1.7 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PI3_PI4_kinase | 0.57 | 48.0 | 3.82e-01 | 100.0% | 45.3% |
| 4026952 | 206.1.1.7 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PI3_PI4_kinase | 0.57 | 49.0 | 3.95e-01 | 99.5% | 49.1% |
| 3564920 | 206.1.1.7 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PI3_PI4_kinase | 0.55 | 50.0 | 3.82e-01 | 100.0% | 44.6% |
| 3277277 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.55 | 51.0 | 4.05e-01 | 100.0% | 67.5% |
| 3739543 | 206.1.1.7 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PI3_PI4_kinase | 0.55 | 50.0 | 3.77e-01 | 100.0% | 41.1% |
| 4012632 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.55 | 50.0 | 3.81e-01 | 99.5% | 43.1% |
| 3489289 | 206.1.1.7 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PI3_PI4_kinase | 0.54 | 50.0 | 3.84e-01 | 99.5% | 53.7% |
| 3472796 | 206.1.1.7 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PI3_PI4_kinase | 0.53 | 49.0 | 3.82e-01 | 99.5% | 51.0% |
| 3574959 | 206.1.1.7 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PI3_PI4_kinase | 0.53 | 49.0 | 3.86e-01 | 100.0% | 62.9% |
| 3948108 | 206.1.1.24 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › HipA_C,Couple_hipA | 0.52 | 48.0 | 3.61e-01 | 100.0% | 43.9% |
| 4017561 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.51 | 47.0 | 3.79e-01 | 100.0% | 70.4% |
| 3283217 | 206.1.1.24 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › HipA_C,Couple_hipA | 0.51 | 47.0 | 3.76e-01 | 100.0% | 52.5% |
| 3163956 | 206.1.1.23 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › HipA_C | 0.50 | 46.0 | 3.74e-01 | 100.0% | 60.1% |
| 3251575 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.50 | 47.0 | 3.73e-01 | 100.0% | 61.4% |
| 1291888 | 206.1.1.7 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PI3_PI4_kinase | 0.50 | 46.0 | 3.71e-01 | 100.0% | 63.5% |
D5
medium
residues 577-649
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1x5bA01 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.66 | 40.0 | 3.29e-01 | 100.0% | 33.3% |
| 6ynwH01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.58 | 45.0 | 4.57e-01 | 98.6% | 85.1% |
| 4gmqA00 | 1.10.8.840 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ribosome-associated complex head domain | 0.53 | 34.0 | 3.19e-01 | 94.5% | 51.1% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5077428 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 41.0 | 3.86e-01 | 97.3% | 57.8% |
| 3244600 | 101.1.2.178 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_61 | 0.58 | 40.0 | 3.55e-01 | 97.3% | 49.5% |
| 4121314 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.55 | 46.0 | 4.20e-01 | 93.2% | 69.5% |
| 3173158 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.54 | 36.0 | 4.19e-01 | 83.6% | 100.0% |
| 4001278 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.53 | 43.0 | 3.52e-01 | 93.2% | 75.3% |