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NC_049451.1__YP_009882572.1__HYP80_gp15__00015

Bact-Vir

NC_049451.1__YP_009882572.1__HYP80_gp15__00015

Identity

Accession:
NC_049451 ↗
Kingdom:
phage

Quality

96.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 15-25_98-165
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1am7A00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.89 87.0 6.65e-01 100.0% 92.2%
4pt1B00 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.62 43.0 3.67e-01 89.9% 44.5%
4dccA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.62 46.0 4.79e-01 96.2% 86.5%
1cscA01 1.10.580.10 Mainly Alpha › Orthogonal Bundle › Citrate Synthase; domain 1 › Citrate Synthase, domain 1 0.55 39.0 2.65e-01 74.7% 68.7%
1adeA02 1.10.300.10 Mainly Alpha › Orthogonal Bundle › Adenylosuccinate Synthetase, subunit A; domain 2 › Adenylosuccinate Synthetase, subunit A, domain 2 0.54 45.0 4.28e-01 97.5% 93.0%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3947950 235.1.1.33 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › PF31186 1.00 98.0 7.35e-01 100.0% 94.4%
D2 medium residues 26-97
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1am7A00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.93 77.0 5.76e-01 100.0% 40.3%
2d8bA01 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.54 44.0 3.67e-01 95.8% 87.9%
1rfeA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 41.0 3.45e-01 88.9% 72.8%