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NC_049452.1__YP_009882635.1__HYP81_gp36__00036

Bact-Vir

NC_049452.1__YP_009882635.1__HYP81_gp36__00036

Identity

Accession:
NC_049452 ↗
Kingdom:
phage

Quality

88.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-136
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF12571.14 best Phage_tail_fib 111.3 6.00e-32 100.0% 86.0%
D2 medium residues 150-222_348-356
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ritA01 3.90.1150.170 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.60 46.0 3.36e-01 82.9% 87.1%
3eo4D00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 40.0 3.21e-01 70.7% 95.1%
1wwzA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 38.0 3.12e-01 70.7% 98.7%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 40.0 3.61e-01 75.6% 77.7%
3islA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.50 34.0 2.96e-01 70.7% 84.4%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3598932 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.91 43.0 3.89e-01 76.8% 37.1%
3395113 3223.1.1.1 beta sandwiches › Amiloride-sensitive cation channel 2 › Amiloride-sensitive cation channel 2 › Amiloride-sensitive cation channel 2 › ASC 0.54 49.0 3.06e-01 98.8% 72.9%
3743227 109.4.1.3071 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, HEAT_EZ, Importin_rep_4, TOR1L1_N, TPR_IMB1, TPR_IPO5 0.54 43.0 2.47e-01 86.6% 16.7%