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NC_049467.1__YP_009884203.1__HYP97_gp26__00063

Bact-Vir

NC_049467.1__YP_009884203.1__HYP97_gp26__00063

Identity

Accession:
NC_049467 ↗
Kingdom:
phage

Quality

64.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Schitoviridae› Pylasvirus› Klebsiella_phage_KpCHEMY26

TaxID: 2596966

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-87
PDB
Domain cluster: representative
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 46.0 4.94e-01 82.7% 69.6%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.75 44.0 5.42e-01 80.2% 94.1%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.73 48.0 4.82e-01 85.2% 66.3%
1igqB00 2.30.30.150 Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain 0.72 44.0 5.14e-01 87.7% 87.7%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.71 47.0 5.15e-01 76.5% 82.1%
2jngA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 45.0 4.64e-01 87.7% 70.1%
2p39A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.69 47.0 3.90e-01 70.4% 93.0%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 46.0 5.11e-01 85.2% 87.7%
3zuaA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.66 42.0 3.58e-01 87.7% 40.5%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 46.0 5.25e-01 80.2% 98.3%
3k8uA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.65 45.0 3.79e-01 100.0% 43.5%
2yrvA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 55.0 4.88e-01 91.4% 71.7%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 45.0 4.24e-01 72.8% 60.0%
1wjrA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 49.0 4.24e-01 82.7% 77.2%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 45.0 5.03e-01 79.0% 95.2%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 45.0 4.74e-01 81.5% 81.9%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 45.0 5.06e-01 79.0% 98.4%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 45.0 4.87e-01 80.2% 89.6%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 43.0 4.66e-01 80.2% 84.3%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 45.0 4.98e-01 82.7% 96.9%
2cnxA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 44.0 2.95e-01 75.3% 66.3%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 47.0 4.44e-01 82.7% 81.2%
2daqA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 49.0 4.45e-01 88.9% 84.5%
1k1zA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 45.0 4.61e-01 80.2% 84.6%
3feoB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 45.0 4.53e-01 82.7% 81.9%
8badA01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.59 42.0 3.52e-01 76.5% 100.0%
1uebA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 39.0 4.36e-01 70.4% 100.0%
1n27A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 51.0 4.84e-01 100.0% 86.5%
3q7yA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.57 41.0 3.57e-01 76.5% 100.0%
3jb9L00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 41.0 2.80e-01 76.5% 82.9%
4ry2A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.56 41.0 3.52e-01 95.1% 46.1%
5ov3B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 39.0 2.72e-01 76.5% 85.5%
2vobB02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.55 47.0 3.50e-01 96.3% 42.1%
2id0A04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 36.0 3.52e-01 71.6% 75.9%
1z87A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 39.0 3.68e-01 82.7% 81.0%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4058174 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.85 53.0 5.87e-01 96.3% 78.5%
3651961 4.1.1.251 ↗ beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5 0.82 47.0 5.69e-01 79.0% 85.5%
4011604 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.80 53.0 5.48e-01 86.4% 73.3%
3474715 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 54.0 5.94e-01 93.8% 87.7%
3562168 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.78 51.0 4.91e-01 71.6% 60.0%
4372288 4.1.1.238 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.78 46.0 5.26e-01 80.2% 80.0%
4147056 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.78 51.0 4.77e-01 71.6% 55.0%
3907619 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.76 51.0 5.08e-01 71.6% 65.9%
3398093 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.76 45.0 5.23e-01 80.2% 81.7%
3508415 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.76 50.0 4.23e-01 71.6% 42.3%
4098870 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.76 51.0 4.84e-01 82.7% 58.9%
4000280 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 45.0 5.41e-01 80.2% 89.1%
3389169 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.75 50.0 4.92e-01 70.4% 64.7%
3881119 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.75 50.0 5.05e-01 70.4% 68.8%
3795121 4.1.1.110 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 0.75 44.0 4.92e-01 81.5% 73.8%
3879064 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.75 49.0 4.77e-01 71.6% 61.1%
3230082 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.75 50.0 4.66e-01 71.6% 56.0%
3617111 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.74 49.0 4.72e-01 96.3% 60.0%
4629022 4.1.1.238 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.74 46.0 4.96e-01 81.5% 72.9%
4002896 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.74 50.0 4.82e-01 71.6% 62.2%
3883159 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.74 49.0 4.73e-01 70.4% 61.1%
3999723 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 51.0 4.10e-01 71.6% 38.7%
3938389 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.73 50.0 4.94e-01 70.4% 67.1%
3881123 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.73 48.0 4.79e-01 71.6% 64.7%
3765289 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.73 48.0 4.69e-01 71.6% 61.1%
2725406 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.73 51.0 5.08e-01 71.6% 86.6%
547 4.1.1.49 ↗ beta barrels › SH3 › SH3 › SH3 › KorB_C 0.73 44.0 5.30e-01 86.4% 92.6%
3393319 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.73 50.0 4.45e-01 71.6% 51.8%
3765274 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 50.0 4.86e-01 71.6% 64.4%
3547106 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.72 50.0 4.84e-01 71.6% 65.6%
3840679 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.72 50.0 4.74e-01 72.8% 61.1%
3920666 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.72 49.0 4.74e-01 71.6% 63.3%
3671986 4.1.1.238 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.72 46.0 4.95e-01 81.5% 75.7%
4026282 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.71 49.0 4.72e-01 70.4% 66.7%
3389177 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.71 49.0 4.51e-01 70.4% 97.0%
3547084 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.71 50.0 4.82e-01 72.8% 66.7%
3492982 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.71 57.0 4.73e-01 85.2% 80.0%
3498280 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 57.0 4.79e-01 85.2% 81.5%
3576438 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 48.0 4.67e-01 70.4% 65.6%
3516048 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 48.0 4.52e-01 71.6% 93.0%
3479037 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 47.0 4.81e-01 70.4% 85.0%
3261235 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.69 48.0 4.72e-01 71.6% 69.4%
4420173 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.68 44.0 4.59e-01 96.3% 70.7%
3407855 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.68 47.0 4.60e-01 71.6% 65.6%
3541241 4.1.1.8 ↗ beta barrels › SH3 › SH3 › SH3 › IN_DBD_C 0.68 42.0 4.76e-01 80.2% 83.3%
3407854 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.68 46.0 4.41e-01 70.4% 95.8%
3517728 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.67 46.0 4.97e-01 95.1% 82.9%
3294392 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.66 45.0 4.44e-01 97.5% 65.9%
3576128 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 52.0 4.62e-01 88.9% 63.5%
3482646 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 49.0 3.63e-01 82.7% 59.0%
3669494 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.63 48.0 3.92e-01 81.5% 86.0%
4121981 4.1.1.325 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 0.63 51.0 4.37e-01 86.4% 80.8%
3198731 4.1.1.249 ↗ beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.63 51.0 4.31e-01 86.4% 78.5%
3169607 4.1.1.238 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.62 48.0 4.98e-01 81.5% 89.3%
None — 0.60 47.0 2.63e-01 81.5% 91.3%
3240406 4.1.1.347 ↗ beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 0.56 50.0 4.47e-01 100.0% 71.3%
3302817 4.1.1.362 ↗ beta barrels › SH3 › SH3 › SH3 › KOW6_SPT51-2, KOW7_SPT5 0.53 46.0 4.23e-01 100.0% 76.1%