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NC_049468.1__YP_009884224.1__HYP98_gp03__00003

Bact-Vir

NC_049468.1__YP_009884224.1__HYP98_gp03__00003

Identity

Accession:
NC_049468 ↗
Kingdom:
phage

Quality

80.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 12-68_134-148_167-227
PDB
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 29.0 3.68e-01 94.0% 97.0%
2ke9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 29.0 3.74e-01 92.5% 100.0%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 27.0 3.54e-01 91.0% 95.3%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 24.0 3.29e-01 94.7% 92.9%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 25.0 3.30e-01 90.2% 94.9%
2p4tA00 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.51 25.0 3.35e-01 95.5% 98.3%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3736175 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 31.0 3.74e-01 82.0% 81.2%
3973076 109.1.1.0 alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C 0.57 31.0 2.60e-01 82.0% 30.0%
1778160 109.1.1.6 alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_2 0.55 32.0 2.69e-01 92.5% 30.8%
3252839 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.54 29.0 3.67e-01 96.2% 90.7%
4000858 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.53 28.0 3.61e-01 95.5% 92.9%
3991896 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.53 33.0 3.77e-01 99.2% 87.4%
4932493 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 25.0 3.25e-01 79.7% 84.6%
4242302 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.52 25.0 3.13e-01 95.5% 77.1%
3583296 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.52 29.0 3.66e-01 92.5% 98.6%
3269589 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.52 26.0 3.28e-01 90.2% 84.3%
3479042 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.52 29.0 3.57e-01 97.0% 97.1%
4218488 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.51 28.0 3.43e-01 76.7% 87.5%
3482680 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.51 27.0 3.45e-01 91.7% 98.5%
D2 medium residues 69-133_149-166
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1gq2A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 41.0 2.86e-01 89.2% 78.3%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5055000 3896.1.1.2 alpha duplicates or obligate multimers › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase › DUF92 0.50 37.0 2.62e-01 78.3% 53.9%