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NC_049478.1__YP_009885131.1__HYQ08_gp051__00051

Bact-Vir

NC_049478.1__YP_009885131.1__HYQ08_gp051__00051

Identity

Accession:
NC_049478 ↗
Kingdom:
phage

Quality

71.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 10-78
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ekfA01 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.64 40.0 4.57e-01 91.3% 93.5%
2di0A01 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.62 41.0 4.67e-01 88.4% 100.0%
1c9bA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.59 49.0 4.47e-01 95.7% 86.6%
7ml0M01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.58 45.0 4.34e-01 88.4% 96.3%
2ccmA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.54 40.0 2.99e-01 91.3% 28.9%
2gmyD00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.52 37.0 2.99e-01 76.8% 62.1%
2wb0X01 1.10.269.10 Mainly Alpha › Orthogonal Bundle › Adenovirus Single-stranded Dna-binding Protein, domain 1 › Adenovirus DNA-binding, N-terminal domain 0.52 38.0 3.26e-01 78.3% 89.7%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3734062 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.61 52.0 4.92e-01 100.0% 89.4%
3165437 316.1.1.9 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › GlnE 0.61 53.0 3.51e-01 100.0% 35.7%
3858971 103.1.1.94 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › PF26112 0.53 47.0 4.40e-01 100.0% 88.2%