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NC_049478.1__YP_009885134.1__HYQ08_gp054__00054

Bact-Vir

NC_049478.1__YP_009885134.1__HYQ08_gp054__00054

Identity

Accession:
NC_049478 ↗
Kingdom:
phage

Quality

70.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Mufasoctovirus› Arthrobacter_phage_Mufasa8

TaxID: 2656526

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-65
PDB
Domain cluster: representative
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3lx7A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 60.0 6.12e-01 100.0% 87.0%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.77 64.0 6.29e-01 100.0% 84.6%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.74 59.0 5.99e-01 100.0% 89.6%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 66.0 6.12e-01 100.0% 79.7%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 64.0 5.45e-01 100.0% 69.1%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 60.0 5.80e-01 100.0% 80.4%
2ckkA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.73 63.0 5.99e-01 100.0% 87.7%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.72 63.0 4.86e-01 100.0% 51.4%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 62.0 6.22e-01 100.0% 95.9%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 59.0 5.60e-01 100.0% 78.0%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 62.0 5.31e-01 100.0% 70.5%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 59.0 5.41e-01 100.0% 71.4%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.70 55.0 5.62e-01 95.8% 91.3%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.70 59.0 5.67e-01 100.0% 83.3%
2efiA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 60.0 4.80e-01 100.0% 49.0%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 60.0 5.67e-01 100.0% 91.7%
2f5kA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 58.0 5.82e-01 100.0% 98.0%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 58.0 5.69e-01 100.0% 94.3%
3ceyB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 59.0 4.24e-01 100.0% 35.5%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 58.0 5.43e-01 100.0% 93.3%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 57.0 5.18e-01 100.0% 85.1%
7jiuA03 3.30.1010.10 Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 0.67 53.0 3.99e-01 95.8% 60.3%
2rprA00 2.20.25.240 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.66 52.0 4.37e-01 97.9% 49.4%
4k7cA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.63 54.0 3.20e-01 100.0% 23.9%
2xanA01 3.30.200.110 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Inositol-pentakisphosphate 2-kinase, N-lobe 0.63 51.0 3.65e-01 89.6% 70.6%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.62 51.0 4.69e-01 100.0% 71.6%
1vwxA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 52.0 4.50e-01 100.0% 67.5%
2x0qA01 3.30.310.280 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.61 49.0 3.61e-01 89.6% 36.1%
1df0A02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.61 50.0 4.12e-01 100.0% 50.0%
2rm4A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 50.0 4.63e-01 100.0% 77.3%
4jr7A02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 52.0 3.85e-01 95.8% 85.0%
1ycyA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 49.0 4.65e-01 100.0% 79.0%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 48.0 4.17e-01 100.0% 65.5%
5cemA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 51.0 4.50e-01 100.0% 93.2%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.56 46.0 4.26e-01 100.0% 72.7%
4lrjA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 43.0 3.91e-01 91.7% 87.7%
1pguA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 45.0 2.83e-01 97.9% 22.5%
2qmiA02 2.40.128.210 Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain 0.56 47.0 3.73e-01 95.8% 52.0%
3w15A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 42.0 2.65e-01 93.8% 98.5%
2o3oA02 3.30.310.160 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › YycH protein, domain 2 0.55 45.0 3.44e-01 95.8% 54.2%
3b79A00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.53 43.0 3.34e-01 100.0% 37.6%
1vr5A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.53 46.0 3.32e-01 100.0% 78.9%
3ml4C01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 43.0 3.46e-01 100.0% 75.9%
4q5eA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 41.0 3.67e-01 91.7% 89.3%
1y4wA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.53 41.0 2.55e-01 97.9% 33.8%
2y8tA03 2.10.70.70 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.52 36.0 3.54e-01 75.0% 65.5%
1pfjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 40.0 3.21e-01 91.7% 65.7%
ECOD (76)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4534931 4.1.1.175 ↗ beta barrels › SH3 › SH3 › SH3 › MSSS 0.83 65.0 5.58e-01 100.0% 54.7%
3854862 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.79 64.0 5.09e-01 100.0% 45.3%
3585474 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 70.0 5.38e-01 100.0% 64.8%
3333322 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.78 65.0 4.64e-01 100.0% 32.6%
3937776 4.1.1.308 ↗ beta barrels › SH3 › SH3 › SH3 › PF31073 0.78 70.0 6.06e-01 100.0% 84.9%
3998022 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.78 64.0 6.13e-01 100.0% 78.2%
3342793 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.78 67.0 4.41e-01 100.0% 24.2%
3404936 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.77 63.0 6.26e-01 100.0% 86.0%
None — 0.77 64.0 3.44e-01 100.0% 5.1%
3723465 4.1.1.5 ↗ beta barrels › SH3 › SH3 › SH3 › KOW,Ribosomal_L14e 0.76 68.0 4.78e-01 100.0% 34.5%
3924760 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 69.0 5.51e-01 100.0% 62.2%
3786430 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 62.0 6.17e-01 100.0% 88.0%
3784334 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.75 62.0 5.77e-01 100.0% 73.3%
3588727 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 67.0 5.87e-01 100.0% 80.0%
3866038 4.1.1.154 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4772 0.75 63.0 5.20e-01 100.0% 52.9%
4420173 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.75 67.0 5.69e-01 100.0% 62.7%
4890270 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.75 61.0 5.93e-01 100.0% 81.5%
3793311 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.74 64.0 6.01e-01 100.0% 95.0%
3457106 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.72 64.0 5.78e-01 100.0% 81.5%
3207081 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.72 62.0 5.66e-01 100.0% 93.8%
3915732 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 62.0 5.18e-01 100.0% 64.7%
3187350 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 62.0 5.63e-01 100.0% 84.6%
3914746 4.1.1.128 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_4 0.71 59.0 5.23e-01 100.0% 64.3%
3642001 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.71 62.0 5.53e-01 100.0% 82.9%
3368864 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.70 62.0 5.62e-01 100.0% 81.5%
3451171 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 61.0 5.58e-01 100.0% 73.8%
3596994 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 59.0 5.86e-01 95.8% 90.0%
3631165 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 59.0 5.01e-01 100.0% 72.9%
3387378 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.70 60.0 5.04e-01 100.0% 67.1%
3174058 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.69 59.0 5.19e-01 100.0% 74.7%
3231154 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 59.0 5.04e-01 100.0% 60.0%
3475429 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 59.0 5.29e-01 100.0% 91.4%
3938415 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 58.0 5.33e-01 100.0% 92.3%
3743614 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.68 59.0 5.57e-01 100.0% 80.0%
3853153 4.1.1.134 ↗ beta barrels › SH3 › SH3 › SH3 › MUM1-like_PWWP 0.68 60.0 4.32e-01 100.0% 37.8%
3574587 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 53.0 4.40e-01 87.5% 68.9%
3999507 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 56.0 5.10e-01 100.0% 85.7%
3590858 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 55.0 5.23e-01 100.0% 88.3%
3356605 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.67 57.0 4.71e-01 100.0% 76.7%
3587030 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 55.0 5.00e-01 100.0% 78.6%
3223930 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.67 57.0 3.69e-01 100.0% 23.9%
3352642 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.66 56.0 3.42e-01 97.9% 19.7%
3706000 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.66 55.0 4.90e-01 100.0% 85.3%
3801719 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.66 56.0 5.04e-01 100.0% 77.1%
3948255 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 56.0 4.15e-01 100.0% 36.9%
3588736 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 52.0 4.92e-01 100.0% 81.5%
4449344 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.65 47.0 3.89e-01 79.2% 84.4%
3590884 219.1.1.28 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.65 54.0 4.06e-01 100.0% 42.9%
3520308 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 55.0 4.50e-01 100.0% 58.9%
5000741 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.65 52.0 4.77e-01 100.0% 69.2%
3520092 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.64 51.0 4.41e-01 97.9% 55.0%
4011774 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.64 53.0 3.59e-01 100.0% 50.5%
3520226 101.1.1.388 ↗ alpha arrays › HTH › HTH › Three-helical HTH › FLYWCH 0.64 53.0 3.98e-01 97.9% 36.2%
3409554 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.64 55.0 4.43e-01 100.0% 84.2%
4069560 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 54.0 4.77e-01 100.0% 78.7%
3700770 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 52.0 4.95e-01 100.0% 85.0%
3517453 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.63 52.0 4.48e-01 97.9% 57.5%
5042986 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 50.0 4.82e-01 100.0% 85.0%
3992026 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.62 48.0 4.47e-01 97.9% 66.2%
3437541 389.1.1.0 ↗ few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.62 50.0 3.81e-01 93.8% 42.5%
3390503 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.61 50.0 4.58e-01 97.9% 69.2%
5022491 4.1.1.182 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2097 0.60 49.0 4.25e-01 100.0% 60.0%
3172870 4.1.1.67 ↗ beta barrels › SH3 › SH3 › SH3 › FDF 0.60 50.0 4.13e-01 100.0% 53.7%
4293453 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 50.0 4.35e-01 100.0% 60.0%
3333660 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.59 48.0 3.39e-01 93.8% 58.7%
4079197 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 44.0 3.84e-01 100.0% 52.9%
3641703 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.56 49.0 2.83e-01 100.0% 21.6%
3210897 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 47.0 3.99e-01 100.0% 71.8%
3388997 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.55 45.0 2.66e-01 100.0% 39.4%
4352841 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.55 44.0 3.83e-01 93.8% 81.2%
4559371 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 44.0 4.18e-01 100.0% 79.4%
4204477 1.1.5.81 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PF27476 0.54 41.0 3.54e-01 93.8% 86.2%
5019700 5090.1.1.6 ↗ beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › S-layer 0.53 45.0 3.62e-01 100.0% 77.0%
3765767 5.1.5.110 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_FAM234A_B 0.52 40.0 2.39e-01 97.9% 16.0%
3601532 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.52 44.0 2.61e-01 100.0% 23.5%
3584246 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.51 40.0 3.35e-01 100.0% 84.6%