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NC_049494.1__YP_009887036.1__HYQ24_gp016__00016

Bact-Vir

NC_049494.1__YP_009887036.1__HYQ24_gp016__00016

Identity

Accession:
NC_049494 ↗
Kingdom:
phage

Quality

77.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Hadassahvirus› Acinetobacter_phage_vB_AbaM_PhT2

TaxID: 2690230

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 24-106
PDB
Domain cluster: representative
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ed4A02 3.30.1120.10 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.74 55.0 5.54e-01 77.1% 94.0%
3vsmA03 2.60.40.4340 Mainly Beta › Sandwich › Immunoglobulin-like › 0.65 47.0 4.52e-01 88.0% 66.0%
4ba0A01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.65 51.0 3.90e-01 85.5% 99.5%
1hdhA02 3.30.1120.10 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.64 47.0 4.85e-01 77.1% 90.9%
2f2hA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.64 50.0 3.58e-01 84.3% 89.0%
8ornD01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.62 52.0 4.12e-01 94.0% 84.7%
4innA00 2.40.128.520 Mainly Beta › Beta Barrel › Lipocalin › 0.61 53.0 4.36e-01 95.2% 82.9%
1ukfA00 3.90.70.20 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.61 52.0 3.96e-01 100.0% 41.0%
5b4wA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 47.0 3.03e-01 86.7% 51.4%
1o70A02 2.30.180.10 Mainly Beta › Roll › FAS1 domain › FAS1 domain 0.59 45.0 3.65e-01 86.7% 43.6%
3f6zB01 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.58 48.0 4.99e-01 91.6% 97.5%
3al9A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 46.0 2.97e-01 91.6% 53.5%
2ovsA00 2.40.128.380 Mainly Beta › Beta Barrel › Lipocalin › T3SS negative regulator GrlR 0.57 50.0 4.51e-01 98.8% 90.7%
1iwmA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.57 48.0 3.84e-01 95.2% 84.2%
1ealA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 48.0 4.22e-01 95.2% 98.4%
3cpxA02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.56 38.0 4.29e-01 100.0% 95.2%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 35.0 3.87e-01 98.8% 85.7%
2jpiA00 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.54 41.0 3.96e-01 95.2% 71.9%
3n6rA03 3.30.700.30 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › 0.54 49.0 4.17e-01 100.0% 82.0%
3fy6A01 3.30.2210.10 Alpha Beta › 2-Layer Sandwich › Integron cassette protein fold › Integron cassette protein superfamily 0.54 45.0 4.17e-01 91.6% 91.6%
2fmlA02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.54 46.0 3.68e-01 94.0% 89.0%
3mpxA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 42.0 4.00e-01 92.8% 72.2%
4z9mB02 3.30.590.10 Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain 0.53 45.0 3.53e-01 98.8% 66.7%
4mxtA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.53 46.0 3.63e-01 98.8% 78.1%
3lxqA01 3.30.1120.80 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.53 46.0 4.37e-01 97.6% 83.8%
1fgyA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 43.0 3.80e-01 94.0% 78.6%
2e50B02 3.30.1120.90 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Nucleosome assembly protein 0.52 41.0 3.77e-01 86.7% 92.8%
5mu3B00 3.40.50.12050 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 41.0 3.30e-01 86.7% 76.1%
3mazA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.50 43.0 4.08e-01 96.4% 93.9%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3725357 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.64 52.0 3.12e-01 86.7% 36.2%
3692276 12.3.1.19 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 0.64 52.0 3.74e-01 86.7% 91.3%
3411657 12.3.1.19 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 0.63 50.0 3.46e-01 86.7% 88.3%
3164898 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.63 40.0 3.90e-01 98.8% 56.8%
4002544 5.1.4.298 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd 0.63 44.0 2.70e-01 73.5% 41.1%
3281771 9.1.1.4 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META 0.62 53.0 4.89e-01 95.2% 92.7%
4322675 220.1.1.121 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SLA1 0.60 46.0 4.17e-01 92.8% 61.8%
3253551 219.1.1.6 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.59 48.0 3.43e-01 92.8% 38.1%
5037569 12.3.1.19 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 0.59 46.0 3.55e-01 85.5% 96.9%
3990213 220.1.1.7 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS 0.57 47.0 4.41e-01 92.8% 73.0%
3056895 71.1.1.7 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_2 0.57 51.0 3.90e-01 98.8% 80.5%
3648040 331.17.1.1 ↗ a+b two layers › TBP-like › Atp11 › Atp11 › ATP11 0.57 51.0 4.02e-01 100.0% 75.9%
3842631 4.1.1.243 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa 0.55 35.0 3.76e-01 92.8% 77.1%
3248113 219.1.1.6 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.55 44.0 3.19e-01 92.8% 38.3%
3520852 3794.1.1.0 ↗ a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.55 45.0 3.84e-01 96.4% 81.3%
4975637 241.2.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like 0.55 44.0 4.50e-01 86.7% 90.0%
4302938 292.2.1.0 ↗ a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.54 46.0 4.60e-01 94.0% 97.6%
4988664 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 43.0 4.50e-01 92.8% 94.7%
4981443 5.1.11.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed 0.53 44.0 2.85e-01 91.6% 85.3%
3601975 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 46.0 3.01e-01 96.4% 86.6%
3861490 220.1.1.118 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › RHG20_PH 0.51 44.0 4.12e-01 92.8% 82.0%
4637164 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.50 37.0 3.20e-01 80.7% 93.1%
3927945 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 38.0 3.48e-01 92.8% 60.0%
5043752 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.50 42.0 3.03e-01 92.8% 78.4%