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NC_049494.1__YP_009887140.1__HYQ24_gp120__00120

Bact-Vir

NC_049494.1__YP_009887140.1__HYQ24_gp120__00120

Identity

Accession:
NC_049494 ↗
Kingdom:
phage

Quality

91.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-103
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2bzyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 28.0 3.38e-01 83.2% 66.1%
3au4A04 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 38.0 4.01e-01 96.0% 69.9%
3pg7A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 40.0 3.89e-01 99.0% 66.4%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 28.0 3.39e-01 80.2% 75.0%
2codA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 35.0 3.66e-01 99.0% 72.9%
4k17B01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 43.0 4.24e-01 100.0% 84.7%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3256547 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 36.0 3.67e-01 96.0% 64.0%
3417244 220.1.1.64 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C1_MyoVII 0.57 38.0 3.94e-01 99.0% 72.6%
3919542 220.1.1.7 beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS 0.57 37.0 3.78e-01 99.0% 67.0%
4995470 2003.1.11.16 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › AdoHcyase_NAD 0.54 41.0 2.81e-01 82.2% 88.0%
4979137 211.1.1.1 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.54 24.0 3.15e-01 96.0% 78.0%
3699577 220.1.1.236 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_27 0.53 37.0 3.65e-01 99.0% 66.4%
3896415 220.1.1.7 beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS 0.52 36.0 3.71e-01 99.0% 73.7%
3326969 3497.1.1.1 beta barrels › Replication foci-targeting sequence N-terminal domain › Replication foci-targeting sequence N-terminal domain › Replication foci-targeting sequence N-terminal domain › DNMT1-RFD 0.52 43.0 3.72e-01 89.1% 82.6%
3614421 220.1.1.236 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_27 0.52 36.0 3.62e-01 99.0% 71.0%
3478983 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 38.0 3.80e-01 99.0% 78.1%