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NC_049497.1__YP_009966821.1__HYQ27_gp099__00099
Bact-VirNC_049497.1__YP_009966821.1__HYQ27_gp099__00099
Identity
- Accession:
- NC_049497 ↗
- Kingdom:
- phage
Quality
80.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Ackermannviridae›
Kuttervirus›
Salmonella_phage_Se-J
TaxID: 2698910
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 13-67
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gwqA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.72 | 53.0 | 3.48e-01 | 92.7% | 18.9% |
| 3dnfA02 | 3.40.50.11270 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.69 | 50.0 | 4.43e-01 | 94.5% | 53.0% |
| 4gx0B04 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.66 | 45.0 | 3.50e-01 | 90.9% | 30.5% |
| 8dgeA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.64 | 52.0 | 3.25e-01 | 96.4% | 19.7% |
| 1ka1A01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.60 | 49.0 | 3.36e-01 | 94.5% | 79.5% |
| 1k92A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.60 | 50.0 | 3.61e-01 | 98.2% | 32.5% |
| 1bqbA02 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.58 | 49.0 | 3.61e-01 | 94.5% | 56.2% |
| 3by6C01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 47.0 | 4.29e-01 | 94.5% | 84.4% |
| 3bleA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 44.0 | 2.89e-01 | 96.4% | 18.6% |
| 5ybwA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 43.0 | 3.69e-01 | 90.9% | 95.9% |
| 5iduA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.55 | 45.0 | 3.67e-01 | 100.0% | 72.5% |
| 1z21A00 | 1.10.10.1000 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Type III secretion system virulence factor YopR, core domain | 0.53 | 41.0 | 3.68e-01 | 100.0% | 68.8% |
| 1fiuA00 | 3.40.50.10010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Type-2 restriction enzyme NgoMIV | 0.53 | 41.0 | 2.72e-01 | 98.2% | 17.5% |
| 2vk2A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 42.0 | 3.17e-01 | 98.2% | 33.9% |
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 45.0 | 4.28e-01 | 98.2% | 82.1% |
| 4h0eA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 40.0 | 3.84e-01 | 100.0% | 92.9% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4125048 | 7588.1.1.1 ↗ | a/b three-layered sandwiches › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › LYTB | 0.67 | 53.0 | 4.15e-01 | 100.0% | 40.0% |
| 4205896 | 7588.1.1.1 ↗ | a/b three-layered sandwiches › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › LYTB | 0.67 | 52.0 | 4.36e-01 | 100.0% | 48.0% |
| 4495998 | 7588.1.1.1 ↗ | a/b three-layered sandwiches › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › LYTB | 0.67 | 52.0 | 4.33e-01 | 100.0% | 46.7% |
| 4531694 | 3498.1.1.2 ↗ | alpha arrays › RNA polymerase sigma factor rpoD N-terminal domain › RNA polymerase sigma factor rpoD N-terminal domain › RNA polymerase sigma factor rpoD N-terminal domain › Sigma70_r1_1 | 0.66 | 51.0 | 4.86e-01 | 85.5% | 80.0% |
| 3389681 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.61 | 52.0 | 3.20e-01 | 98.2% | 16.9% |
| 3839100 | 298.1.1.8 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C | 0.61 | 51.0 | 4.01e-01 | 100.0% | 72.3% |
| 5047729 | 2006.1.3.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim | 0.58 | 45.0 | 3.45e-01 | 92.7% | 35.6% |
| 1718755 | 2007.1.2.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 | 0.56 | 44.0 | 3.79e-01 | 92.7% | 53.8% |
| 4992704 | 2003.1.2.40 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_oxidored | 0.55 | 44.0 | 2.69e-01 | 96.4% | 13.3% |
| 2491334 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 48.0 | 4.19e-01 | 100.0% | 87.1% |
| 3966140 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.54 | 45.0 | 4.08e-01 | 94.5% | 85.3% |
| 3808845 | 5086.1.1.90 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › V_ATPase_I | 0.53 | 42.0 | 3.07e-01 | 87.3% | 56.0% |
D2
medium
residues 68-142
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3pcrA01 | 3.10.450.460 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain | 0.73 | 48.0 | 4.44e-01 | 100.0% | 53.2% |
| 1ospO02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.73 | 48.0 | 3.78e-01 | 100.0% | 34.9% |
| 4esqA00 | 3.40.1000.70 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain | 0.72 | 54.0 | 3.98e-01 | 100.0% | 30.9% |
| 7snsB01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.69 | 50.0 | 3.93e-01 | 77.3% | 82.7% |
| 3p02A02 | 2.40.128.440 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14274, DUF4361 | 0.69 | 50.0 | 3.89e-01 | 76.0% | 100.0% |
| 7ob9B01 | 3.90.1110.10 | Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 | 0.68 | 51.0 | 3.78e-01 | 100.0% | 31.2% |
| 4fpwB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.65 | 46.0 | 3.61e-01 | 100.0% | 34.8% |
| 2gf6A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.64 | 51.0 | 4.18e-01 | 85.3% | 79.7% |
| 5tz6B02 | 3.10.129.120 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › | 0.63 | 52.0 | 4.08e-01 | 89.3% | 71.4% |
| 2kcdA00 | 3.10.450.250 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › S. aureus uracil DNA glycosylase inhibitor | 0.62 | 55.0 | 4.74e-01 | 100.0% | 65.0% |
| 1wv4B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 46.0 | 3.66e-01 | 80.0% | 72.7% |
| 1sgoA01 | 3.30.2280.10 | Alpha Beta › 2-Layer Sandwich › copper amine oxidase-like fold › Hypothetical protein (hspc210) | 0.62 | 42.0 | 3.78e-01 | 100.0% | 50.0% |
| 2fujA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.62 | 48.0 | 4.17e-01 | 85.3% | 89.8% |
| 7c38B01 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.61 | 54.0 | 3.58e-01 | 100.0% | 29.1% |
| 4agiA00 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.61 | 54.0 | 3.58e-01 | 100.0% | 46.2% |
| 4mjgA00 | 3.30.2030.30 | Alpha Beta › 2-Layer Sandwich › TBP-like › | 0.61 | 43.0 | 3.33e-01 | 76.0% | 62.1% |
| 6ruiB04 | 3.90.1110.10 | Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 | 0.61 | 44.0 | 3.45e-01 | 100.0% | 33.0% |
| 2hboA01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.60 | 47.0 | 3.94e-01 | 85.3% | 72.9% |
| 2hx5A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.60 | 49.0 | 3.93e-01 | 88.0% | 87.4% |
| 4n4bA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.59 | 53.0 | 3.47e-01 | 100.0% | 50.2% |
| 3wmyA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.58 | 52.0 | 3.47e-01 | 100.0% | 49.0% |
| 3h3hB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 49.0 | 4.29e-01 | 100.0% | 92.5% |
| 6htnA01 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.57 | 51.0 | 4.18e-01 | 100.0% | 67.9% |
| 8cukB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 51.0 | 3.33e-01 | 100.0% | 27.1% |
| 1c8uA01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.56 | 43.0 | 3.47e-01 | 85.3% | 67.3% |
| 7fisA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.56 | 48.0 | 3.28e-01 | 100.0% | 50.2% |
| 5ksdA04 | 3.40.1110.10 | Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N | 0.55 | 50.0 | 3.98e-01 | 100.0% | 57.4% |
| 2aq5A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 47.0 | 3.10e-01 | 100.0% | 37.1% |
| 4emoC00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 46.0 | 4.00e-01 | 98.7% | 62.1% |
| 1wbaA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.53 | 46.0 | 3.60e-01 | 100.0% | 51.5% |
| 4kujA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 45.0 | 3.71e-01 | 100.0% | 99.3% |
| 5ighA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 44.0 | 4.22e-01 | 94.7% | 97.7% |
| 3eb7A03 | 2.100.10.10 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Pesticidal crystal protein, central domain | 0.52 | 41.0 | 3.06e-01 | 86.7% | 72.1% |
| 1gyvA00 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.52 | 45.0 | 3.83e-01 | 96.0% | 77.5% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3618896 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.79 | 51.0 | 5.46e-01 | 100.0% | 76.6% |
| 3707862 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.79 | 55.0 | 5.41e-01 | 100.0% | 67.5% |
| 2452960 | 520.1.1.0 ↗ | beta sandwiches › gp9 N-terminal domain-like › gp9 N-terminal domain-related › gp9 N-terminal domain-related | 0.79 | 61.0 | 5.71e-01 | 100.0% | 67.8% |
| 3974649 | 243.19.1.0 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains | 0.75 | 61.0 | 5.73e-01 | 100.0% | 72.2% |
| 4978331 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.74 | 50.0 | 5.18e-01 | 82.7% | 74.3% |
| 4025256 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.74 | 48.0 | 4.71e-01 | 92.0% | 62.5% |
| 5011833 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.72 | 50.0 | 4.44e-01 | 100.0% | 51.4% |
| 3502044 | 243.19.1.0 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains | 0.70 | 61.0 | 5.41e-01 | 100.0% | 67.6% |
| 5039832 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.69 | 49.0 | 3.79e-01 | 74.7% | 80.0% |
| 3881962 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.67 | 50.0 | 3.78e-01 | 100.0% | 32.4% |
| 3601782 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.66 | 49.0 | 3.13e-01 | 84.0% | 16.9% |
| 3703423 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.66 | 42.0 | 3.42e-01 | 94.7% | 35.6% |
| 3629277 | 5.1.5.89 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PF31099 | 0.66 | 58.0 | 3.63e-01 | 100.0% | 22.7% |
| 3677568 | 5.1.4.78 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › TFIIIC_delta | 0.66 | 59.0 | 3.57e-01 | 100.0% | 24.3% |
| 3519803 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.66 | 49.0 | 3.71e-01 | 100.0% | 32.1% |
| 3366726 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.66 | 49.0 | 3.61e-01 | 100.0% | 30.0% |
| 3652840 | 708.1.1.9 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › CG-1 | 0.66 | 50.0 | 4.86e-01 | 82.7% | 80.0% |
| 3466272 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.65 | 59.0 | 3.59e-01 | 100.0% | 22.8% |
| 3694998 | 101.1.1.361 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Beta-prop_RSE1_1st | 0.63 | 56.0 | 3.35e-01 | 98.7% | 67.0% |
| 3934570 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.63 | 54.0 | 3.45e-01 | 96.0% | 41.1% |
| 3410461 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.63 | 55.0 | 3.59e-01 | 100.0% | 26.8% |
| 3188943 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.63 | 54.0 | 3.44e-01 | 98.7% | 37.8% |
| 3238631 | 2484.1.1.190 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FBA_2 | 0.63 | 49.0 | 3.41e-01 | 86.7% | 33.1% |
| 3486624 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.62 | 55.0 | 3.51e-01 | 100.0% | 23.8% |
| 4024970 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.62 | 54.0 | 3.35e-01 | 97.3% | 19.8% |
| 3401205 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.60 | 53.0 | 3.29e-01 | 100.0% | 34.8% |
| 4022921 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.60 | 54.0 | 3.48e-01 | 100.0% | 70.8% |
| 4159881 | 220.1.1.197 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF28623 | 0.60 | 52.0 | 4.83e-01 | 96.0% | 78.9% |
| 1097232 | 3180.1.1.1 ↗ | a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › EspG | 0.60 | 43.0 | 3.89e-01 | 77.3% | 65.4% |
| 3615785 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.60 | 51.0 | 2.95e-01 | 96.0% | 21.6% |
| 3782836 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.59 | 52.0 | 3.35e-01 | 100.0% | 38.3% |
| 3767813 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.59 | 52.0 | 3.50e-01 | 100.0% | 35.7% |
| 2553379 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.59 | 51.0 | 3.33e-01 | 100.0% | 40.0% |
| 3515770 | 5.1.4.258 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 | 0.58 | 51.0 | 3.46e-01 | 100.0% | 33.9% |
| 3810743 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.58 | 52.0 | 3.62e-01 | 100.0% | 36.3% |
| 5009577 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.58 | 51.0 | 4.31e-01 | 100.0% | 62.4% |
| 3973550 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 50.0 | 3.25e-01 | 100.0% | 27.5% |
| 3583444 | 9.1.1.12 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › THAP4_heme-bd | 0.57 | 43.0 | 3.79e-01 | 100.0% | 53.0% |
| 3262392 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.57 | 50.0 | 3.38e-01 | 100.0% | 30.8% |
| 5034411 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.56 | 49.0 | 3.19e-01 | 100.0% | 26.5% |
| 4017127 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.56 | 48.0 | 3.32e-01 | 98.7% | 46.8% |
| 3215469 | 5.1.4.33 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF1899,WD40_4 | 0.56 | 50.0 | 3.17e-01 | 100.0% | 34.5% |
| 3704471 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 46.0 | 4.38e-01 | 94.7% | 95.6% |
| 3710572 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 46.0 | 2.99e-01 | 96.0% | 35.9% |
| 3217866 | 222.1.1.10 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 | 0.53 | 41.0 | 3.68e-01 | 85.3% | 83.6% |
| 3921621 | 2003.1.5.359 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth, Methyltransf_25 | 0.52 | 41.0 | 2.45e-01 | 89.3% | 20.6% |
| 3816821 | 210.1.2.8 ↗ | a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › TANGO2 | 0.51 | 45.0 | 3.12e-01 | 100.0% | 35.3% |
| 3254671 | 206.1.1.13 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Alpha_kinase | 0.50 | 43.0 | 3.07e-01 | 98.7% | 54.8% |
| 3405513 | 210.1.2.8 ↗ | a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › TANGO2 | 0.50 | 45.0 | 3.03e-01 | 100.0% | 33.6% |
D3
medium
residues 145-267
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2v43A01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.66 | 38.0 | 3.29e-01 | 78.0% | 37.7% |
| 3s2kB01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.57 | 41.0 | 3.11e-01 | 74.8% | 39.9% |
| 1s4uX00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 42.0 | 3.04e-01 | 78.0% | 72.5% |
| 3b7fA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 45.0 | 3.23e-01 | 86.2% | 50.0% |
| 3kstA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 41.0 | 3.11e-01 | 76.4% | 65.3% |
| 1txkA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.53 | 48.0 | 3.43e-01 | 100.0% | 73.0% |
| 1vkdA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 39.0 | 2.89e-01 | 75.6% | 50.3% |
| 2qe8A00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.52 | 41.0 | 3.04e-01 | 84.6% | 64.4% |
| 3nqzA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 32.0 | 3.73e-01 | 76.4% | 90.5% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4888729 | 243.19.1.0 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains | 0.76 | 57.0 | 6.11e-01 | 77.2% | 95.3% |
| 3392393 | 5.1.4.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1 | 0.59 | 43.0 | 3.03e-01 | 74.8% | 52.4% |
| 3741447 | 5.1.4.42 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_4 | 0.59 | 42.0 | 3.06e-01 | 73.2% | 50.3% |
| 3419181 | 5.1.3.144 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like | 0.58 | 42.0 | 3.17e-01 | 74.8% | 47.1% |
| 3806993 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.58 | 41.0 | 3.24e-01 | 72.4% | 50.2% |
| 3466272 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.57 | 41.0 | 2.81e-01 | 74.8% | 69.3% |
| 3819081 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.57 | 41.0 | 3.07e-01 | 74.8% | 45.6% |
| 3453930 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 41.0 | 3.14e-01 | 74.8% | 82.5% |
| 3654903 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.56 | 41.0 | 3.15e-01 | 75.6% | 80.7% |
| 3224154 | 5.1.4.304 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR11_2nd | 0.56 | 41.0 | 3.00e-01 | 76.4% | 60.9% |
| 3723616 | 5.1.4.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase | 0.55 | 48.0 | 3.33e-01 | 95.1% | 71.2% |
| 3263689 | 5.1.4.348 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR75_1st | 0.55 | 41.0 | 2.98e-01 | 76.4% | 53.7% |
| 4027719 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 41.0 | 2.98e-01 | 76.4% | 58.0% |
| 3827251 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.55 | 39.0 | 2.84e-01 | 72.4% | 48.5% |
| 5035552 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 39.0 | 3.14e-01 | 74.8% | 58.0% |
| 3202006 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.54 | 43.0 | 3.05e-01 | 85.4% | 64.8% |
| 4069988 | 3304.1.1.2 ↗ | a+b two layers › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › SUS_N | 0.53 | 41.0 | 4.08e-01 | 79.7% | 85.6% |
| 3447653 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.53 | 42.0 | 3.17e-01 | 83.7% | 57.0% |
| 3805876 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.53 | 38.0 | 2.88e-01 | 76.4% | 47.6% |
| 195810 | 5.1.3.11 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › MRJP | 0.52 | 41.0 | 3.04e-01 | 84.6% | 64.4% |
| 4538255 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.52 | 37.0 | 2.88e-01 | 74.8% | 80.6% |