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NC_049499.1__YP_009887400.1__HYQ29_gp063__00063
Bact-VirNC_049499.1__YP_009887400.1__HYQ29_gp063__00063
Identity
- Accession:
- NC_049499 ↗
- Kingdom:
- phage
Quality
87.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Ackermannviridae›
Kuttervirus›
Salmonella_phage_rabagast
TaxID: 2713314
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 33-118
Domain cluster:
rep: IMGVR_UViG_2875764417_000001-2875764417-2875765860__D21-121
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4g5aA00 | 2.60.40.3080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 44.0 | 4.25e-01 | 100.0% | 73.7% |
| 5aguA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.52 | 37.0 | 3.29e-01 | 75.6% | 75.4% |
| 2ix2B00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.51 | 41.0 | 2.96e-01 | 88.4% | 97.1% |
| 4cvuA05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 40.0 | 4.04e-01 | 95.3% | 85.4% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3440138 | 1.1.11.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain | 0.59 | 46.0 | 4.79e-01 | 86.0% | 92.5% |
| 4032095 | 6043.1.1.6 ↗ | a+b two layers › yfeY-like › yfeY-like › yfeY-like › PF28288 | 0.53 | 32.0 | 3.42e-01 | 94.2% | 69.3% |
| 3531849 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.52 | 41.0 | 4.16e-01 | 100.0% | 88.2% |
| 4954883 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.51 | 40.0 | 2.91e-01 | 87.2% | 78.5% |
| 4991451 | 213.1.1.17 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › DUF1122 | 0.51 | 35.0 | 3.06e-01 | 72.1% | 73.6% |