←Back to structures
NC_049499.1__YP_009887449.1__HYQ29_gp112__00112
Bact-VirNC_049499.1__YP_009887449.1__HYQ29_gp112__00112
Identity
- Accession:
- NC_049499 ↗
- Kingdom:
- phage
Quality
78.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Ackermannviridae›
Kuttervirus›
Salmonella_phage_rabagast
TaxID: 2713314
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-74
Domain cluster:
rep: KJ174317.1__AHK61415.1__X__00064__D16-72
D2
medium
residues 75-127
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26869.1 best | Phage_T4_gp2 | 36.2 | 4.70e-09 | 90.6% | 13.5% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3x2hA00 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.57 | 45.0 | 3.28e-01 | 96.2% | 97.2% |
| 3h09A04 | 4.10.1240.40 | Few Secondary Structures › Irregular › Hormone receptor fold › | 0.51 | 31.0 | 2.91e-01 | 96.2% | 44.4% |
| 7d4rB01 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.51 | 37.0 | 2.62e-01 | 86.8% | 27.8% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3447437 | 4.18.1.1 ↗ | beta barrels › SH3 › Plus3 › Plus3 › Plus-3 | 0.59 | 50.0 | 3.82e-01 | 100.0% | 45.2% |
| 3512101 | 246.1.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › CN_hydrolase | 0.57 | 43.0 | 2.77e-01 | 84.9% | 40.4% |
| 3574766 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.52 | 40.0 | 2.74e-01 | 92.5% | 42.4% |
| 3630477 | 221.4.1.7 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › MRP-L46 | 0.52 | 40.0 | 2.68e-01 | 92.5% | 38.5% |
| 3964102 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.51 | 40.0 | 3.11e-01 | 92.5% | 78.6% |