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NC_049831.1__YP_009902311.1__H1N97_gp83__00083
Bact-VirNC_049831.1__YP_009902311.1__H1N97_gp83__00083
Identity
- Accession:
- NC_049831 ↗
- Kingdom:
- phage
Quality
80.0
mean pLDDT
Taxonomy
TaxID: 2848075
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-66
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4aw8A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.61 | 49.0 | 3.58e-01 | 90.6% | 79.6% |
| 3h8zA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 36.0 | 4.02e-01 | 70.3% | 81.2% |
| 6eufA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.58 | 45.0 | 2.93e-01 | 85.9% | 26.6% |
| 1bm8A00 | 3.10.260.10 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Transcription regulator HTH, APSES-type DNA-binding domain | 0.58 | 39.0 | 3.46e-01 | 70.3% | 100.0% |
| 2dk1A00 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.57 | 33.0 | 3.57e-01 | 84.4% | 68.0% |
| 2h1eA02 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.57 | 45.0 | 4.75e-01 | 90.6% | 100.0% |
| 1dgsA04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 46.0 | 4.42e-01 | 90.6% | 100.0% |
| 1sgoA01 | 3.30.2280.10 | Alpha Beta › 2-Layer Sandwich › copper amine oxidase-like fold › Hypothetical protein (hspc210) | 0.57 | 40.0 | 3.47e-01 | 76.6% | 63.9% |
| 2dx0B01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.56 | 38.0 | 3.62e-01 | 95.3% | 58.7% |
| 7sz2A01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.56 | 49.0 | 4.41e-01 | 100.0% | 79.3% |
| 4h75A00 | 2.80.10.70 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty | 0.56 | 41.0 | 2.87e-01 | 78.1% | 80.4% |
| 5d3xB00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 42.0 | 3.33e-01 | 82.8% | 45.4% |
| 1a15A00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 35.0 | 3.52e-01 | 98.4% | 64.2% |
| 3vpbE00 | 2.20.28.160 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.54 | 38.0 | 3.99e-01 | 85.9% | 85.7% |
| 4gouA02 | 2.30.29.200 | Mainly Beta › Roll › PH-domain like › | 0.54 | 41.0 | 3.18e-01 | 85.9% | 61.4% |
| 1ecsA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.54 | 35.0 | 2.97e-01 | 95.3% | 36.7% |
| 3lxrF00 | 1.10.4120.20 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › | 0.53 | 42.0 | 3.04e-01 | 85.9% | 82.9% |
| 1pfsA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 42.0 | 4.02e-01 | 89.1% | 92.3% |
| 1olzA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 43.0 | 2.64e-01 | 93.8% | 91.4% |
| 1vclA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.52 | 41.0 | 3.21e-01 | 87.5% | 51.0% |
| 3vsfC01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 39.0 | 2.55e-01 | 85.9% | 31.0% |
| 6eugA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 40.0 | 2.61e-01 | 90.6% | 39.8% |
| 2k49A00 | 2.30.29.80 | Mainly Beta › Roll › PH-domain like › | 0.52 | 42.0 | 3.56e-01 | 95.3% | 84.7% |
| 2jneA00 | 2.10.290.10 | Mainly Beta › Ribbon › Rubredoxin-like › YfgJ-like | 0.50 | 31.0 | 3.04e-01 | 100.0% | 52.1% |
| 1qmyA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.50 | 37.0 | 2.95e-01 | 84.4% | 91.7% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3784046 | 59.1.2.1 ↗ | beta complex topology › triple barrel › triple barrel › RNase H2 subunits B and C › RNase_H2_suC | 0.65 | 53.0 | 4.19e-01 | 90.6% | 78.5% |
| 3992209 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.64 | 38.0 | 4.41e-01 | 73.4% | 84.4% |
| 4927858 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 43.0 | 4.55e-01 | 84.4% | 81.8% |
| 3723559 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.62 | 46.0 | 2.90e-01 | 81.2% | 47.5% |
| 3694869 | 6.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil | 0.60 | 48.0 | 3.85e-01 | 90.6% | 50.0% |
| 3652949 | 5.1.5.85 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40_RFWD3 | 0.57 | 46.0 | 3.06e-01 | 92.2% | 93.7% |
| 3303919 | 59.1.1.16 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › PF30948 | 0.57 | 43.0 | 3.86e-01 | 84.4% | 82.1% |
| 3934185 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.56 | 48.0 | 3.85e-01 | 100.0% | 93.5% |
| 4937423 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 42.0 | 3.95e-01 | 100.0% | 63.5% |
| 3945059 | 9.1.1.6 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › NlpE | 0.55 | 47.0 | 4.10e-01 | 100.0% | 89.5% |
| 3268619 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 47.0 | 3.49e-01 | 98.4% | 67.6% |
| 3583597 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 39.0 | 3.51e-01 | 98.4% | 55.6% |
| 3371511 | 1.1.1.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_C+TAXi_N | 0.53 | 40.0 | 2.57e-01 | 87.5% | 36.5% |
| 4027119 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.53 | 41.0 | 3.20e-01 | 82.8% | 48.9% |
| 5072279 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.53 | 41.0 | 2.48e-01 | 82.8% | 23.3% |
| 3173120 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.53 | 37.0 | 2.38e-01 | 76.6% | 42.8% |
| 3670098 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.53 | 29.0 | 2.94e-01 | 70.3% | 49.2% |
| 3544420 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.52 | 37.0 | 3.63e-01 | 79.7% | 67.1% |
| 3669903 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.52 | 40.0 | 2.49e-01 | 87.5% | 28.3% |
| 3933100 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.51 | 41.0 | 4.06e-01 | 96.9% | 82.9% |
| 3230428 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.51 | 38.0 | 3.13e-01 | 82.8% | 50.0% |
| 4974908 | 239.3.1.1 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain › Fasciclin | 0.51 | 40.0 | 3.17e-01 | 93.8% | 69.5% |