Back to structures

NC_049834.1__YP_009902534.1__H1O00_gp63__00063

Bact-Vir

NC_049834.1__YP_009902534.1__H1O00_gp63__00063

Identity

Accession:
NC_049834 ↗
Kingdom:
phage

Quality

63.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 136-181
PDB
D2 medium residues 68-133
PDB
CATH (84)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3keyA02 3.30.1370.230 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain 0.75 66.0 6.08e-01 100.0% 89.8%
2c43A01 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.73 55.0 4.26e-01 80.3% 73.4%
3h0dA01 3.30.56.130 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › Transcriptional regulator CtsR, winged HTH domain 0.70 61.0 5.97e-01 97.0% 93.0%
2kl8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.68 47.0 4.32e-01 80.3% 55.3%
5xuhA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.68 51.0 4.14e-01 80.3% 95.2%
5suvC00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.68 51.0 4.14e-01 80.3% 95.2%
2bddA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.68 51.0 4.10e-01 80.3% 91.3%
2b0lC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 55.0 4.98e-01 100.0% 66.0%
5xukA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.67 50.0 4.16e-01 80.3% 98.3%
4erdA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.66 43.0 3.62e-01 80.3% 40.7%
4obxA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.66 58.0 3.96e-01 98.5% 45.1%
3mczA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.65 56.0 3.86e-01 100.0% 35.4%
3ocjA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.64 57.0 3.70e-01 100.0% 34.3%
3rrkA03 3.30.70.2750 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 42.0 4.06e-01 80.3% 59.5%
4u1qA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.64 56.0 4.09e-01 100.0% 40.1%
1b24A01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.64 55.0 4.91e-01 97.0% 78.9%
1rzmA01 3.30.70.1140 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phospho-2-dehydro-3-deoxyheptonate aldolase; domain 1 0.63 40.0 3.86e-01 78.8% 53.8%
2nykA02 2.60.40.2530 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 46.0 4.25e-01 98.5% 59.8%
2vd5B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 48.0 3.50e-01 84.8% 39.6%
3dtnA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.62 55.0 3.97e-01 100.0% 35.8%
2cpdA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.61 40.0 3.88e-01 80.3% 58.7%
2wdoA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.60 44.0 3.67e-01 80.3% 97.6%
3dp7A03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 52.0 3.91e-01 98.5% 39.6%
2f2uB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 50.0 3.67e-01 95.5% 38.6%
3jamK00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 51.0 4.57e-01 100.0% 69.8%
2dk8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 48.0 4.83e-01 98.5% 93.8%
2joeA01 3.30.1830.10 Alpha Beta › 2-Layer Sandwich › YehR-like fold › YehR-like 0.59 49.0 3.95e-01 92.4% 57.0%
1u5tA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 49.0 4.77e-01 98.5% 90.7%
5l10B00 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.59 44.0 3.26e-01 80.3% 55.9%
6vudA02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.58 47.0 4.58e-01 100.0% 80.0%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.58 46.0 4.48e-01 100.0% 80.0%
3cuqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 48.0 4.58e-01 98.5% 91.4%
5optn00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 50.0 4.53e-01 100.0% 76.3%
1yyvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 48.0 4.11e-01 100.0% 56.2%
4fppA02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.57 48.0 3.84e-01 95.5% 87.6%
5tvfD00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.57 49.0 3.33e-01 100.0% 27.0%
2mh2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 47.0 4.75e-01 97.0% 98.4%
6ofsA03 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.56 42.0 2.99e-01 81.8% 41.9%
4bxiA00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.56 45.0 3.58e-01 92.4% 59.6%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 45.0 4.09e-01 100.0% 64.0%
3l09A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 46.0 4.40e-01 100.0% 82.1%
3douA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 46.0 3.48e-01 98.5% 36.0%
4qpkB02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.56 48.0 3.87e-01 98.5% 88.8%
1x60A01 3.30.70.1070 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat 0.55 40.0 3.93e-01 80.3% 70.8%
8b6jb01 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.55 41.0 3.02e-01 83.3% 37.6%
2qvoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 46.0 4.27e-01 100.0% 73.6%
2lrrA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.55 44.0 4.41e-01 100.0% 88.6%
3ntvA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 47.0 3.37e-01 98.5% 38.1%
4ig1A00 3.10.520.10 Alpha Beta › Roll › T-fold › ApbE-like domains 0.55 45.0 3.02e-01 100.0% 32.6%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 47.0 4.11e-01 100.0% 62.9%
1zvpD00 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.55 46.0 3.80e-01 100.0% 84.7%
2cxiA01 3.30.56.10 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › 0.54 38.0 3.64e-01 80.3% 62.0%
1sd4A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 43.0 4.43e-01 97.0% 95.3%
1zhvA00 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.54 47.0 3.79e-01 100.0% 81.3%
5hs7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 44.0 3.98e-01 100.0% 64.3%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 45.0 3.96e-01 97.0% 62.9%
3c0wA02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.54 46.0 4.05e-01 100.0% 77.7%
2fswA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 43.0 3.90e-01 100.0% 61.8%
2hoeA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 41.0 4.31e-01 97.0% 100.0%
5x7fA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 45.0 3.33e-01 100.0% 33.3%
1s2oA02 3.90.1070.10 Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › 0.53 43.0 4.21e-01 92.4% 90.1%
3c3pA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 42.0 3.11e-01 100.0% 30.8%
2hqyA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 42.0 3.46e-01 100.0% 46.2%
4r3aA02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.53 45.0 3.62e-01 100.0% 81.0%
3pqvC01 3.65.10.20 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › RNA 3'-terminal phosphate cyclase domain 0.53 44.0 3.05e-01 100.0% 25.5%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 44.0 3.91e-01 100.0% 63.8%
3dlsB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 42.0 3.73e-01 89.4% 72.4%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 42.0 3.82e-01 100.0% 63.4%
1z7uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 3.67e-01 100.0% 58.2%
1r62A00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.52 45.0 3.62e-01 100.0% 83.1%
1gkxA01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.52 46.0 3.53e-01 100.0% 84.1%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 43.0 3.83e-01 100.0% 63.5%
2lfvA00 3.30.70.1070 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat 0.52 33.0 2.92e-01 80.3% 39.6%
4g6qA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 43.0 4.01e-01 100.0% 75.9%
7ewfA01 1.25.40.990 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.51 44.0 3.07e-01 100.0% 29.1%
6hhnA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 37.0 3.44e-01 80.3% 59.8%
1fp2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 42.0 3.83e-01 100.0% 67.7%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 41.0 3.61e-01 97.0% 57.1%
1yjdC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 43.0 3.55e-01 93.9% 66.1%
1mzbA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 42.0 4.02e-01 100.0% 81.7%
3n89A02 3.30.310.210 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.51 38.0 3.07e-01 83.3% 89.1%
5zynB01 3.90.700.10 Alpha Beta › Alpha-Beta Complex › Flavocytochrome C3; Chain A, domain 1 › Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 0.51 40.0 3.22e-01 95.5% 73.5%
3p26A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 39.0 2.86e-01 90.9% 41.4%
5dx9A01 3.30.70.1020 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trehalose-6-phosphate phosphatase related protein; domain 2 0.50 41.0 4.08e-01 100.0% 94.4%
ECOD (94)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5043746 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.74 46.0 4.47e-01 80.3% 56.0%
4562408 101.1.2.76 alpha arrays › HTH › HTH › winged helix domain › CtsR 0.72 65.0 6.25e-01 100.0% 90.7%
3987881 101.1.2.76 alpha arrays › HTH › HTH › winged helix domain › CtsR 0.70 62.0 5.99e-01 100.0% 88.0%
4514876 812.1.1.1 a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE 0.67 50.0 4.96e-01 80.3% 75.7%
None 0.67 59.0 4.14e-01 98.5% 51.4%
None 0.66 58.0 4.19e-01 98.5% 56.3%
3253249 301.8.1.1 a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase › ACPS 0.66 49.0 3.90e-01 80.3% 90.7%
5036173 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.66 56.0 4.02e-01 98.5% 44.3%
5047590 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.65 56.0 3.88e-01 97.0% 47.0%
4171345 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.65 53.0 4.75e-01 97.0% 63.2%
4962955 101.1.2.922 alpha arrays › HTH › HTH › winged helix domain › DUF7123 0.65 55.0 5.18e-01 97.0% 78.8%
3604362 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.64 46.0 4.48e-01 92.4% 68.0%
5051083 328.7.1.1 a+b two layers › IF3-like › Smr domain › Smr domain › Smr 0.64 56.0 5.19e-01 100.0% 85.9%
5014255 220.1.1.87 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 0.64 55.0 4.42e-01 100.0% 85.2%
279560 304.115.1.1 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in DAHP synthase › Ferredoxin-like domain in DAHP synthase › DAHP_snth_FXD 0.63 41.0 4.09e-01 78.8% 63.2%
5037844 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.63 56.0 3.96e-01 100.0% 44.8%
5073115 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.62 55.0 3.96e-01 100.0% 40.2%
4985497 101.1.2.922 alpha arrays › HTH › HTH › winged helix domain › DUF7123 0.62 53.0 4.98e-01 100.0% 77.6%
4028119 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 52.0 5.19e-01 100.0% 94.3%
None 0.61 50.0 3.13e-01 100.0% 14.8%
4949570 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.61 49.0 3.57e-01 87.9% 40.0%
3577575 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.60 49.0 4.63e-01 100.0% 76.2%
4098952 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.60 51.0 4.89e-01 100.0% 82.5%
4937110 101.1.2.128 alpha arrays › HTH › HTH › winged helix domain › DUF2582 0.60 49.0 4.76e-01 98.5% 82.7%
4989805 328.5.1.0 a+b two layers › IF3-like › SirA-like › SirA-like 0.60 48.0 4.78e-01 100.0% 85.7%
4026949 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.60 50.0 3.90e-01 95.5% 68.0%
4937095 225.1.1.0 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.60 49.0 4.12e-01 92.4% 82.6%
4964629 101.1.2.922 alpha arrays › HTH › HTH › winged helix domain › DUF7123 0.60 50.0 4.96e-01 100.0% 94.2%
None 0.59 47.0 2.88e-01 95.5% 12.4%
3268629 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 51.0 5.02e-01 98.5% 100.0%
4012954 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 49.0 4.85e-01 100.0% 90.0%
5082051 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 49.0 4.58e-01 100.0% 78.9%
3169812 101.1.2.57 alpha arrays › HTH › HTH › winged helix domain › EAP30 0.59 50.0 3.89e-01 100.0% 43.8%
4978366 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.59 52.0 5.14e-01 98.5% 100.0%
5048525 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 50.0 4.67e-01 100.0% 83.5%
3263157 312.1.1.7 a+b three layers › HIT-like › HIT-related › HIT-related › ATP_transf 0.59 49.0 3.65e-01 93.9% 64.0%
3494198 328.7.1.0 a+b two layers › IF3-like › Smr domain › Smr domain 0.59 49.0 3.66e-01 98.5% 41.6%
3587599 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 48.0 4.49e-01 100.0% 73.3%
5036673 328.6.1.1 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase 0.58 49.0 3.53e-01 100.0% 60.0%
4477560 328.6.1.1 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase 0.58 50.0 3.58e-01 100.0% 61.9%
5071080 2003.1.5.79 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 0.58 49.0 3.63e-01 100.0% 45.1%
3597486 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 47.0 4.71e-01 100.0% 90.0%
3602556 101.1.2.128 alpha arrays › HTH › HTH › winged helix domain › DUF2582 0.58 46.0 4.66e-01 100.0% 93.8%
3657246 101.1.2.525 alpha arrays › HTH › HTH › winged helix domain › DUF7646 0.58 49.0 4.42e-01 100.0% 73.7%
3357930 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.57 48.0 4.70e-01 100.0% 86.7%
4069824 101.1.9.20 alpha arrays › HTH › HTH › Putative DNA-binding domain › PhetRS_B1 0.57 40.0 3.76e-01 75.8% 64.7%
5048446 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 46.0 4.60e-01 100.0% 92.6%
3705193 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 48.0 4.46e-01 97.0% 90.6%
3165321 101.1.2.280 alpha arrays › HTH › HTH › winged helix domain › HTH_12 0.57 48.0 4.45e-01 100.0% 74.4%
4927192 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 46.0 4.16e-01 100.0% 65.3%
4987785 310.3.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.57 44.0 4.47e-01 98.5% 89.2%
4022139 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.57 50.0 4.76e-01 100.0% 86.3%
1873725 230.4.1.1 a+b two layers › T-fold › ApbE-like › ApbE-like › ApbE 0.56 48.0 3.51e-01 100.0% 53.3%
3452826 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.56 48.0 3.85e-01 100.0% 47.4%
5010617 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 44.0 4.19e-01 100.0% 71.2%
3403298 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 45.0 3.62e-01 98.5% 42.8%
4213063 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.56 46.0 3.92e-01 100.0% 53.3%
4976723 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 47.0 4.71e-01 100.0% 95.7%
4993334 2003.1.5.82 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.56 47.0 3.44e-01 100.0% 38.7%
3481546 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 45.0 4.58e-01 100.0% 96.9%
3184697 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 47.0 4.56e-01 100.0% 86.5%
5016606 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 46.0 3.76e-01 100.0% 95.0%
3306726 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 45.0 4.32e-01 98.5% 90.0%
5000702 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 46.0 4.34e-01 100.0% 77.6%
5026287 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.55 45.0 4.07e-01 100.0% 66.3%
5021360 101.1.2.896 alpha arrays › HTH › HTH › winged helix domain › DUF2551 0.55 46.0 4.27e-01 100.0% 75.3%
4933162 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 44.0 4.51e-01 97.0% 100.0%
3701431 101.1.2.57 alpha arrays › HTH › HTH › winged helix domain › EAP30 0.54 45.0 3.51e-01 100.0% 46.5%
4505080 242.1.1.2 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.54 46.0 3.86e-01 100.0% 66.4%
5082770 225.2.1.1 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › Uncharacterized protein DIP2311 middle domain › Uncharacterized protein DIP2311 middle domain › HATPase_c_4 0.54 45.0 3.41e-01 97.0% 60.6%
3257129 101.1.2.407 alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 0.54 46.0 3.88e-01 100.0% 55.8%
4992412 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 45.0 3.99e-01 100.0% 98.1%
4058951 304.120.1.6 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.54 39.0 3.82e-01 78.8% 69.3%
2719 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.54 43.0 3.90e-01 100.0% 61.8%
4945701 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 43.0 4.11e-01 97.0% 77.6%
3704858 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.54 43.0 3.04e-01 95.5% 60.4%
3789036 328.6.1.2 a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.53 43.0 3.09e-01 100.0% 60.8%
4983310 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.53 45.0 4.02e-01 100.0% 66.0%
3589362 225.1.1.9 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_5 0.53 46.0 3.76e-01 100.0% 80.6%
4943641 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 42.0 4.15e-01 97.0% 82.7%
4999528 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 44.0 4.12e-01 100.0% 76.5%
5031186 101.1.2.39 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.53 44.0 4.30e-01 100.0% 90.7%
3967046 225.1.1.3 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.53 46.0 3.76e-01 100.0% 83.1%
5043135 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.53 43.0 3.95e-01 100.0% 67.4%
3715568 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 43.0 3.94e-01 98.5% 88.4%
3923139 273.1.1.1 a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.52 41.0 3.22e-01 86.4% 52.4%
5050401 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 43.0 3.87e-01 98.5% 66.0%
5064203 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 43.0 3.96e-01 97.0% 71.1%
3944118 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 44.0 4.05e-01 100.0% 74.4%
3597393 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 43.0 3.47e-01 100.0% 49.3%
3381258 101.1.2.245 alpha arrays › HTH › HTH › winged helix domain › PORR 0.52 42.0 3.23e-01 100.0% 35.6%
3390302 101.1.2.512 alpha arrays › HTH › HTH › winged helix domain › PF25877 0.52 45.0 4.15e-01 100.0% 77.6%
4957195 101.1.2.892 alpha arrays › HTH › HTH › winged helix domain › ArsR 0.51 42.0 3.77e-01 100.0% 61.9%
4229465 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.50 41.0 3.93e-01 100.0% 87.5%