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NC_049851.1__YP_009904407.1__H1O17_gp029__00029

Bact-Vir

NC_049851.1__YP_009904407.1__H1O17_gp029__00029

Identity

Accession:
NC_049851 ↗
Kingdom:
phage

Quality

89.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Sarumanvirus› Burkholderia_phage_BcepSauron

TaxID: 2530033

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-74
PDB
Domain cluster: rep: MW291017.1__QPL14133.1__SEA_TURKISHDELIGHT_104__00104__D5-71
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1a15A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.66 42.0 4.40e-01 82.4% 71.6%
4kbmB01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.65 43.0 4.80e-01 87.8% 92.7%
1dz1A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.64 42.0 4.36e-01 81.1% 71.4%
4ft4A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 42.0 2.74e-01 81.1% 15.1%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.59 38.0 4.32e-01 78.4% 88.9%
1atiB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.59 44.0 3.82e-01 79.7% 92.9%
1nj1A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.59 42.0 3.76e-01 75.7% 93.3%
4wi1A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.59 42.0 3.55e-01 75.7% 80.5%
1wu7A03 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.57 43.0 3.95e-01 81.1% 89.7%
3o2zP00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 40.0 3.45e-01 74.3% 75.0%
1adjB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.56 42.0 3.86e-01 78.4% 97.9%
3zuaA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.54 45.0 3.73e-01 93.2% 51.9%
2wfbA00 3.30.420.130 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain 0.54 40.0 3.50e-01 82.4% 76.7%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.53 40.0 4.03e-01 83.8% 96.0%
2r0cA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 42.0 2.90e-01 86.5% 42.7%
4ks7A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 37.0 3.34e-01 73.0% 74.5%
1df0A02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.52 44.0 4.12e-01 93.2% 84.8%
2ivwA01 2.30.30.830 Mainly Beta › Roll › SH3 type barrels. › 0.52 41.0 4.05e-01 86.5% 90.0%
2qe8A00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.52 46.0 2.99e-01 100.0% 80.7%
1lv9A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 34.0 3.56e-01 81.1% 76.6%
4p78C00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.51 35.0 3.70e-01 71.6% 81.8%
4rbnA01 3.10.450.330 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 40.0 3.41e-01 87.8% 65.9%
1a5yA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.51 35.0 2.35e-01 73.0% 28.2%
3t0qA00 3.40.850.10 Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain 0.50 42.0 2.89e-01 97.3% 73.7%
ECOD (46)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3924524 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.78 50.0 5.12e-01 82.4% 68.6%
3626927 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.73 50.0 5.68e-01 86.5% 96.4%
3999896 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.72 48.0 5.41e-01 90.5% 92.7%
3587295 376.1.2.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.71 54.0 5.73e-01 81.1% 100.0%
3212945 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.69 49.0 5.44e-01 82.4% 94.9%
3256917 4.8.1.2 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.67 46.0 4.59e-01 81.1% 69.3%
3402542 4.8.1.2 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.67 44.0 4.44e-01 81.1% 66.7%
3620947 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.66 46.0 5.24e-01 79.7% 98.2%
3618716 4.8.1.2 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.65 44.0 4.80e-01 81.1% 86.7%
3451565 376.1.2.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.63 51.0 4.14e-01 89.2% 47.9%
3826536 376.1.2.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.62 44.0 4.86e-01 77.0% 100.0%
3332568 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.61 43.0 4.02e-01 78.4% 60.0%
3937157 4.8.1.2 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.61 45.0 4.64e-01 81.1% 82.9%
3670182 2.1.1.1 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 0.60 39.0 3.29e-01 81.1% 40.0%
5028505 2.1.1.1 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 0.59 41.0 3.34e-01 73.0% 62.9%
3805691 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.59 41.0 3.69e-01 74.3% 50.0%
1840989 4.8.1.1 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.59 42.0 4.09e-01 81.1% 66.3%
3821671 376.1.1.63 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › C1_2 0.59 41.0 3.49e-01 73.0% 48.0%
3863831 376.1.2.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain 0.58 45.0 3.38e-01 86.5% 44.2%
5030084 206.1.2.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › SAICAR_synt 0.58 50.0 3.33e-01 100.0% 37.5%
3492069 4292.2.1.2 ↗ a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain › KIF1B 0.57 42.0 3.81e-01 79.7% 61.9%
2579126 2.1.1.1 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 0.57 42.0 3.37e-01 78.4% 67.4%
4556597 7502.1.1.1 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.56 42.0 3.97e-01 82.4% 65.6%
3837975 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.56 42.0 3.26e-01 94.6% 36.4%
3214370 209.1.1.1 ↗ a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C 0.55 48.0 3.85e-01 98.6% 86.0%
4882592 2.1.1.1 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 0.55 41.0 3.30e-01 79.7% 67.1%
3696153 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.55 40.0 2.65e-01 78.4% 61.0%
4311607 4272.1.1.1 ↗ a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.54 40.0 3.32e-01 81.1% 54.3%
3598807 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.54 37.0 3.87e-01 73.0% 76.8%
3594572 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 42.0 3.34e-01 85.1% 42.6%
3666058 2.1.1.44 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 0.54 37.0 3.43e-01 71.6% 86.3%
3497893 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.53 31.0 2.87e-01 74.3% 45.3%
4995179 236.3.1.1 ↗ beta barrels › GroES-like › AF1531-like › AF1531-like › DUF655 0.52 36.0 3.49e-01 71.6% 76.5%
3185134 2003.1.2.16 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.52 42.0 2.74e-01 86.5% 40.0%
3251857 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.52 39.0 3.31e-01 85.1% 45.9%
4101533 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.51 39.0 2.49e-01 83.8% 40.7%
3808505 243.3.1.1 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cystatin 0.51 35.0 3.35e-01 70.3% 82.4%
3464671 4.1.1.136 ↗ beta barrels › SH3 › SH3 › SH3 › NMD_SH3 0.51 37.0 3.87e-01 82.4% 82.9%
3500622 2003.1.2.2 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GMC_oxred_N 0.51 45.0 2.90e-01 100.0% 49.7%
3656396 219.1.1.16 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.51 41.0 3.20e-01 89.2% 54.5%
3739035 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.51 36.0 3.92e-01 74.3% 98.3%
3770802 4.1.1.248 ↗ beta barrels › SH3 › SH3 › SH3 › CABIT 0.51 41.0 3.69e-01 87.8% 80.2%
4985505 2011.2.1.7 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 0.50 34.0 2.44e-01 70.3% 76.2%
4927556 2011.2.1.7 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 0.50 34.0 2.51e-01 71.6% 45.8%
4985745 304.48.1.32 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › TiaS-FLD 0.50 36.0 2.88e-01 78.4% 55.2%
4380028 220.1.1.291 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_4 0.50 37.0 3.70e-01 81.1% 75.0%
D2 high residues 78-143
PDB
Domain cluster: representative
CATH (60)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4iggA01 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.72 57.0 5.74e-01 84.8% 82.1%
2mtqA00 1.20.58.130 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.71 47.0 4.60e-01 78.8% 61.6%
1zhcA00 6.10.280.50 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.69 54.0 5.16e-01 84.8% 86.8%
3fxdB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.68 48.0 5.04e-01 78.8% 84.5%
5mdtA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.67 52.0 4.03e-01 84.8% 55.9%
4id0A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.67 52.0 4.39e-01 84.8% 79.5%
1w99A01 1.20.190.10 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain 0.67 56.0 4.08e-01 90.9% 43.4%
2kw6A00 6.10.140.1300 Special › Helix non-globular › Helix Hairpins › 0.67 48.0 4.91e-01 78.8% 78.5%
2yf4F00 1.10.3420.10 Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain 0.66 54.0 4.22e-01 90.9% 48.3%
3m9vA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.65 54.0 4.15e-01 93.9% 75.8%
2oznB01 1.20.1270.90 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like 0.65 48.0 4.51e-01 78.8% 76.2%
1ij5A01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.65 52.0 4.94e-01 86.4% 90.8%
4okvE00 6.10.140.1890 Special › Helix non-globular › Helix Hairpins › 0.64 49.0 4.99e-01 92.4% 84.6%
1cxzB00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.63 46.0 4.23e-01 77.3% 59.3%
4mk3A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.63 49.0 4.11e-01 84.8% 73.9%
4rm7A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.62 50.0 4.03e-01 92.4% 89.9%
1xzpA02 1.20.120.430 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2 0.62 50.0 3.80e-01 90.9% 49.4%
3craA02 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.62 45.0 3.68e-01 78.8% 42.2%
3icxA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.62 47.0 4.56e-01 83.3% 76.0%
2ew2A02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.62 52.0 4.12e-01 98.5% 46.3%
5jrcA00 1.20.58.2140 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 47.0 3.46e-01 84.8% 47.8%
1siqA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.61 49.0 3.86e-01 93.9% 64.5%
1br0A00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 47.0 3.89e-01 84.8% 76.7%
3hr0B01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.61 46.0 4.42e-01 83.3% 81.0%
2y39A00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.60 52.0 4.50e-01 100.0% 90.9%
1m6nA04 1.10.3060.10 Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA 0.60 49.0 3.92e-01 92.4% 44.4%
4h9nC00 1.20.58.2170 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 52.0 3.66e-01 95.5% 33.7%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.60 52.0 4.38e-01 100.0% 84.6%
4ys0A02 1.10.3060.10 Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA 0.60 48.0 3.70e-01 92.4% 37.6%
2db7A01 6.10.250.980 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.60 41.0 4.42e-01 74.2% 90.6%
5fmnA00 1.20.58.1000 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer 0.60 44.0 4.12e-01 81.8% 91.9%
1nktA04 1.10.3060.10 Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA 0.59 49.0 3.62e-01 92.4% 34.5%
3mekA04 1.25.40.970 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.59 42.0 4.07e-01 98.5% 65.0%
4ymuD00 1.10.3720.10 Mainly Alpha › Orthogonal Bundle › MetI-like fold › MetI-like 0.59 49.0 3.57e-01 100.0% 87.0%
1w0bA01 1.20.58.420 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP 0.59 49.0 4.55e-01 100.0% 75.0%
3d3mA00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.59 47.0 3.65e-01 92.4% 59.0%
4f92B10 1.10.3380.10 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › Sec63 N-terminal domain-like domain 0.59 47.0 3.71e-01 89.4% 77.6%
4adzA00 1.20.58.1000 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer 0.59 44.0 4.08e-01 84.8% 92.2%
7zxkC01 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.59 45.0 3.51e-01 84.8% 69.3%
2efeA01 1.10.246.120 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.58 44.0 4.26e-01 87.9% 75.3%
3vayA02 1.20.120.1600 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.58 48.0 4.41e-01 92.4% 100.0%
3lsjA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.57 44.0 3.46e-01 97.0% 37.3%
3o60A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.57 46.0 3.50e-01 95.5% 44.0%
3h36A00 1.10.10.400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain 0.57 49.0 4.73e-01 100.0% 84.6%
4hyqA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.57 47.0 3.34e-01 100.0% 49.2%
4hwdD00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.57 47.0 4.36e-01 97.0% 80.0%
4g12A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.57 45.0 3.53e-01 90.9% 38.9%
4ex8A00 3.40.1790.10 Alpha Beta › 3-Layer(aba) Sandwich › Indigoidine synthase fold › Indigoidine synthase domain 0.56 44.0 2.92e-01 87.9% 34.9%
1ax8A00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.56 45.0 3.70e-01 90.9% 100.0%
1j77A00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.56 46.0 3.31e-01 92.4% 72.4%
5axmB00 3.30.70.3000 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) 0.56 49.0 3.34e-01 98.5% 29.7%
1j1jA02 1.20.58.200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 0.55 39.0 3.62e-01 78.8% 57.6%
2px7A00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.55 45.0 3.26e-01 92.4% 90.1%
2h7oA01 1.20.120.1330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Rac1-binding domain, N-terminal GTPase binding subdomain 0.55 41.0 3.46e-01 84.8% 83.7%
1wa8A00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.55 44.0 3.92e-01 90.9% 60.6%
3ilkA02 1.10.8.590 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.53 36.0 3.65e-01 80.3% 69.1%
2yinA03 1.20.58.740 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › DOCK DHR2 domain, lobe C 0.53 42.0 3.48e-01 89.4% 63.3%
3dcfA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.53 42.0 3.49e-01 97.0% 47.2%
1t3dA01 1.10.3130.10 Mainly Alpha › Orthogonal Bundle › serine acetyltransferase, domain 1 › serine acetyltransferase, domain 1 0.52 43.0 3.41e-01 92.4% 46.4%
5dvwA00 1.20.120.1160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.51 33.0 2.81e-01 80.3% 34.8%
ECOD (43)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3603171 3684.1.1.0 ↗ alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like 0.70 54.0 3.98e-01 84.8% 56.6%
3707613 3877.1.1.0 ↗ alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC 0.69 55.0 3.78e-01 100.0% 23.6%
4981678 1075.5.1.0 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter 0.69 59.0 3.99e-01 100.0% 35.1%
3463858 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.69 49.0 4.35e-01 77.3% 51.0%
4038749 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.69 53.0 4.45e-01 84.8% 60.9%
3516571 605.1.1.202 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › PhoLip_ATPase_N 0.67 54.0 5.53e-01 90.9% 100.0%
4008053 4168.1.1.7 ↗ alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain › PF26769 0.66 54.0 4.04e-01 89.4% 37.6%
3495293 1203.1.2.0 ↗ alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 0.66 47.0 3.68e-01 75.8% 44.3%
3607638 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.66 55.0 3.52e-01 92.4% 30.3%
3533245 192.15.1.2 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Mod_r 0.65 51.0 3.79e-01 83.3% 36.3%
3761039 603.1.1.97 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE 0.64 50.0 3.39e-01 84.8% 56.3%
4616055 5059.1.1.2 ↗ alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › Multi_Drug_Res 0.64 52.0 4.45e-01 90.9% 55.5%
3788066 603.2.1.0 ↗ alpha bundles › STAT-like › STAT › STAT 0.64 49.0 3.59e-01 84.8% 43.2%
3709598 601.1.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.63 52.0 4.01e-01 92.4% 43.9%
3236655 109.4.1.1839 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Otopetrin 0.63 49.0 3.42e-01 86.4% 25.5%
3700263 601.11.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain › Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain 0.63 51.0 3.97e-01 92.4% 43.9%
5054165 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 50.0 3.58e-01 92.4% 66.4%
4951649 5054.1.1.2 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans 0.62 49.0 3.94e-01 84.8% 58.5%
3742303 310.2.1.1 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF 0.62 53.0 3.88e-01 100.0% 89.2%
4203622 310.2.1.1 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF 0.62 52.0 3.87e-01 93.9% 36.6%
5067572 604.5.1.0 ↗ alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) 0.61 46.0 3.99e-01 81.8% 51.4%
3660192 7516.1.1.156 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › PF28460 0.61 48.0 3.02e-01 97.0% 15.8%
4646569 4994.1.1.1 ↗ alpha duplicates or obligate multimers › EF2458-like › EF2458-like › EF2458-like › DUF1507 0.61 51.0 4.62e-01 97.0% 69.5%
3736660 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.61 46.0 3.75e-01 84.8% 63.7%
3929480 2486.1.1.3 ↗ a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Carboxyl_trans 0.61 48.0 2.98e-01 92.4% 14.4%
4679975 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.60 51.0 3.24e-01 98.5% 36.4%
3218643 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.60 49.0 4.28e-01 90.9% 62.9%
3839889 601.51.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-helical domain in phase 1 flagellin › alpha-helical domain in phase 1 flagellin 0.60 49.0 3.84e-01 90.9% 44.1%
3497418 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.60 48.0 4.27e-01 90.9% 71.0%
5083776 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.58 47.0 4.24e-01 90.9% 80.0%
3194704 109.6.1.3 ↗ alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF_N 0.58 44.0 3.41e-01 83.3% 53.5%
3784055 192.24.1.0 ↗ alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain 0.57 46.0 3.82e-01 92.4% 47.7%
4189329 6026.1.1.36 ↗ alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain › AlaE 0.57 47.0 3.85e-01 93.9% 96.2%
3600869 3567.1.1.0 ↗ a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer 0.57 46.0 3.88e-01 90.9% 67.0%
3412555 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.56 46.0 3.96e-01 93.9% 64.5%
4979325 310.2.1.0 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.56 48.0 4.34e-01 100.0% 73.7%
5066143 5041.1.1.0 ↗ extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C 0.55 42.0 4.10e-01 92.4% 76.0%
5054424 5058.1.1.2 ↗ alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st 0.54 42.0 4.01e-01 92.4% 72.5%
3618144 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 49.0 3.15e-01 100.0% 32.1%
3936662 2004.1.1.184 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.54 45.0 2.86e-01 95.5% 17.8%
3921890 603.2.1.1 ↗ alpha bundles › STAT-like › STAT › STAT › STAT_alpha 0.53 45.0 3.53e-01 95.5% 70.3%
3981690 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.53 44.0 3.96e-01 93.9% 88.4%
3613690 6126.1.1.1 ↗ alpha bundles › Helical domain in EHD2 › Helical domain in EHD2 › Helical domain in EHD2 › DUF5600 0.51 41.0 3.45e-01 100.0% 49.2%