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NC_049851.1__YP_009904408.1__H1O17_gp030__00030
Bact-VirNC_049851.1__YP_009904408.1__H1O17_gp030__00030
Identity
- Accession:
- NC_049851 ↗
- Kingdom:
- phage
Quality
72.8
mean pLDDT
Taxonomy
TaxID: 2530033
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-77
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jtvA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 46.0 | 4.82e-01 | 100.0% | 75.4% |
| 1ufmA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 48.0 | 4.56e-01 | 100.0% | 69.0% |
| 5trdA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 49.0 | 4.62e-01 | 100.0% | 73.8% |
| 1in4A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 42.0 | 4.27e-01 | 100.0% | 78.1% |
| 4j25F00 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.57 | 49.0 | 3.72e-01 | 100.0% | 86.6% |
| 4fvaC00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.56 | 42.0 | 2.99e-01 | 84.7% | 54.6% |
| 2dm9A00 | 3.30.2320.30 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › ATP synthase, E subunit, C-terminal | 0.55 | 40.0 | 3.48e-01 | 79.2% | 60.2% |
| 3l7oA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 38.0 | 3.80e-01 | 86.1% | 72.2% |
| 3kkfA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 36.0 | 3.23e-01 | 84.7% | 51.4% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5053899 | 320.2.1.1 ↗ | a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 | 0.66 | 49.0 | 5.02e-01 | 100.0% | 82.9% |
| 4498369 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.60 | 48.0 | 4.49e-01 | 100.0% | 68.9% |
| 5080847 | 101.1.2.90 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_9 | 0.59 | 48.0 | 4.88e-01 | 100.0% | 90.0% |
| 5045249 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 51.0 | 4.78e-01 | 100.0% | 82.4% |
| 1519214 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.54 | 49.0 | 4.37e-01 | 100.0% | 73.5% |
| 3598154 | 278.1.1.0 ↗ | a+b complex topology › Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain › Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain › Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | 0.53 | 43.0 | 3.50e-01 | 97.2% | 85.0% |