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NC_049851.1__YP_009904482.1__H1O17_gp104__00104
Bact-VirNC_049851.1__YP_009904482.1__H1O17_gp104__00104
Identity
- Accession:
- NC_049851 ↗
- Kingdom:
- phage
Quality
88.3
mean pLDDT
Taxonomy
TaxID: 2530033
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-70
Domain cluster:
rep: Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00537__D2-60
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7b3aA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.63 | 46.0 | 3.58e-01 | 94.2% | 36.2% |
| 3dciA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.59 | 44.0 | 3.26e-01 | 84.1% | 96.1% |
| 2b78A02 | 3.30.750.80 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › RNA methyltransferase domain (HRMD) like | 0.59 | 41.0 | 3.65e-01 | 95.7% | 50.0% |
| 5zi7A02 | 3.30.2010.30 | Alpha Beta › 2-Layer Sandwich › Zincin-like › | 0.59 | 37.0 | 3.50e-01 | 82.6% | 52.9% |
| 2nteB01 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.58 | 44.0 | 3.86e-01 | 84.1% | 55.6% |
| 4zpxA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 47.0 | 3.32e-01 | 91.3% | 55.8% |
| 4wxmB00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 45.0 | 3.74e-01 | 85.5% | 90.7% |
| 5fc1A01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.58 | 49.0 | 3.02e-01 | 94.2% | 30.2% |
| 1wjqA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 48.0 | 4.62e-01 | 94.2% | 87.2% |
| 6whjD00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.55 | 45.0 | 2.99e-01 | 92.8% | 82.9% |
| 7z79A02 | 3.20.10.10 | Alpha Beta › Alpha-Beta Barrel › D-amino Acid Aminotransferase; Chain A, domain 2 › D-amino Acid Aminotransferase, subunit A, domain 2 | 0.55 | 45.0 | 3.49e-01 | 100.0% | 40.1% |
| 2z51A02 | 3.30.300.130 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › Fe-S cluster assembly (FSCA) | 0.55 | 36.0 | 3.64e-01 | 94.2% | 66.7% |
| 3netB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.54 | 41.0 | 3.73e-01 | 85.5% | 88.8% |
| 1vhxB00 | 3.30.420.140 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain | 0.54 | 46.0 | 3.71e-01 | 97.1% | 92.0% |
| 2e6xA00 | 3.10.20.570 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Protein of unknown function DUF3248 | 0.53 | 39.0 | 3.94e-01 | 97.1% | 80.9% |
| 2q0yA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 44.0 | 3.57e-01 | 94.2% | 81.9% |
| 4q7qB00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.52 | 44.0 | 3.01e-01 | 94.2% | 93.0% |
| 2pt7G01 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.52 | 41.0 | 3.99e-01 | 95.7% | 76.9% |
| 2ymbA00 | 3.30.870.30 | Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › MITD, C-terminal phospholipase D-like domain | 0.52 | 40.0 | 3.26e-01 | 91.3% | 85.6% |
| 3aj3A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.51 | 44.0 | 2.97e-01 | 98.6% | 28.2% |
| 3ztvA01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.51 | 43.0 | 2.78e-01 | 98.6% | 49.6% |
| 2br6A01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.50 | 43.0 | 3.04e-01 | 98.6% | 30.7% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4992153 | 4076.2.1.0 ↗ | a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like | 0.72 | 61.0 | 6.08e-01 | 92.8% | 90.0% |
| 3478944 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.70 | 59.0 | 5.16e-01 | 94.2% | 99.0% |
| 2526345 | 7081.1.1.0 ↗ | a+b two layers › Transactivation domain (TAD) of FoxM1 › Transactivation domain (TAD) of FoxM1 › Transactivation domain (TAD) of FoxM1 | 0.64 | 46.0 | 4.99e-01 | 95.7% | 98.1% |
| 4444298 | 3012.1.1.4 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Hydrolase_3 | 0.60 | 40.0 | 3.57e-01 | 100.0% | 46.7% |
| 4989684 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.58 | 41.0 | 4.03e-01 | 94.2% | 70.3% |
| 4994961 | 327.11.1.5 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_7 | 0.58 | 39.0 | 3.68e-01 | 98.6% | 55.6% |
| 3304057 | 304.102.1.1 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 | 0.58 | 44.0 | 3.01e-01 | 85.5% | 64.2% |
| 3471616 | 2002.1.1.33 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_20 | 0.58 | 43.0 | 2.81e-01 | 82.6% | 27.6% |
| 5054548 | 327.11.1.5 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_7 | 0.58 | 38.0 | 3.90e-01 | 94.2% | 72.3% |
| 4939243 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.57 | 43.0 | 3.68e-01 | 92.8% | 49.6% |
| 3222275 | 246.2.1.5 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos,ASMase_C | 0.56 | 48.0 | 2.90e-01 | 94.2% | 25.3% |
| 5031376 | 2486.1.1.1 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ECH_1 | 0.56 | 49.0 | 3.36e-01 | 100.0% | 74.7% |
| 3837240 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.56 | 42.0 | 3.20e-01 | 82.6% | 84.6% |
| 3571636 | 206.1.3.35 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DUF5565 | 0.55 | 48.0 | 3.28e-01 | 97.1% | 53.8% |
| 3589366 | 327.11.1.7 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_NusA_2nd | 0.54 | 43.0 | 4.13e-01 | 98.6% | 76.2% |
| 4532819 | 2484.1.1.287 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RsgI_M | 0.54 | 46.0 | 3.59e-01 | 100.0% | 81.2% |
| 4992892 | 3740.1.1.4 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C | 0.54 | 42.0 | 2.82e-01 | 84.1% | 35.9% |
| 3385735 | 327.10.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related | 0.54 | 42.0 | 3.83e-01 | 94.2% | 62.1% |
| 4942543 | 327.11.1.5 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_7 | 0.54 | 36.0 | 3.76e-01 | 94.2% | 75.4% |
| 4198735 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.53 | 45.0 | 3.46e-01 | 98.6% | 79.2% |
| 3615026 | 2486.1.1.0 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase | 0.53 | 45.0 | 2.96e-01 | 98.6% | 58.2% |
| 4855248 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.53 | 41.0 | 3.58e-01 | 92.8% | 54.7% |
| 5023403 | 327.11.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 | 0.53 | 40.0 | 3.91e-01 | 81.2% | 74.7% |
| 4437407 | 327.10.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N | 0.52 | 40.0 | 3.80e-01 | 97.1% | 69.4% |
| 3470027 | 859.1.1.2 ↗ | a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › p31comet | 0.52 | 36.0 | 2.63e-01 | 73.9% | 88.8% |
| 4993307 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.51 | 45.0 | 3.90e-01 | 100.0% | 75.2% |
| 4612895 | 327.10.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N | 0.51 | 36.0 | 3.55e-01 | 94.2% | 70.7% |
| 2984821 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.51 | 38.0 | 3.48e-01 | 82.6% | 96.8% |
| 5063125 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.51 | 43.0 | 3.03e-01 | 98.6% | 42.9% |
| 4981516 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.50 | 44.0 | 3.46e-01 | 100.0% | 65.3% |
| 4085474 | 327.10.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N | 0.50 | 36.0 | 3.60e-01 | 95.7% | 73.3% |