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NC_049851.1__YP_009904533.1__H1O17_gp155__00155
Bact-VirNC_049851.1__YP_009904533.1__H1O17_gp155__00155
Identity
- Accession:
- NC_049851 ↗
- Kingdom:
- phage
Quality
89.7
mean pLDDT
Taxonomy
TaxID: 2530033
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-60
Domain cluster:
representative
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lepA00 | 3.30.70.2350 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 47.0 | 4.44e-01 | 80.8% | 60.3% |
| 1x60A01 | 3.30.70.1070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat | 0.68 | 51.0 | 4.56e-01 | 86.5% | 58.3% |
| 3zleI01 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.67 | 47.0 | 3.86e-01 | 92.3% | 41.1% |
| 5nl9A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 47.0 | 4.15e-01 | 92.3% | 95.2% |
| 2p5kA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 41.0 | 3.93e-01 | 76.9% | 95.2% |
| 2e9hA01 | 3.30.30.170 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.57 | 48.0 | 3.82e-01 | 98.1% | 48.7% |
| 2uytA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.57 | 43.0 | 2.91e-01 | 88.5% | 89.8% |
| 1kn6A00 | 3.30.70.850 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8, pro-domain | 0.57 | 40.0 | 3.69e-01 | 92.3% | 54.8% |
| 1rzmA01 | 3.30.70.1140 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phospho-2-dehydro-3-deoxyheptonate aldolase; domain 1 | 0.57 | 39.0 | 3.53e-01 | 96.2% | 50.0% |
| 7npaA02 | 3.30.70.3340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 48.0 | 4.17e-01 | 100.0% | 67.1% |
| 4fqdB02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.56 | 38.0 | 2.67e-01 | 100.0% | 18.5% |
| 3l4gB03 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.55 | 40.0 | 3.67e-01 | 80.8% | 63.5% |
| 2pt7G02 | 3.30.1370.180 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.55 | 44.0 | 4.15e-01 | 100.0% | 74.6% |
| 3qfhA01 | 3.30.70.80 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 | 0.55 | 37.0 | 3.56e-01 | 94.2% | 56.9% |
| 2f1fA02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.55 | 37.0 | 3.29e-01 | 71.2% | 84.6% |
| 3cz8A02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.54 | 37.0 | 3.69e-01 | 73.1% | 75.4% |
| 1sqgA03 | 3.30.70.1170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 | 0.54 | 37.0 | 3.64e-01 | 80.8% | 67.2% |
| 4jz8B00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.54 | 45.0 | 2.85e-01 | 100.0% | 32.8% |
| 3kxyJ00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.54 | 41.0 | 3.22e-01 | 90.4% | 52.7% |
| 1uxyA01 | 3.90.78.10 | Alpha Beta › Alpha-Beta Complex › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 1 › UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain | 0.53 | 41.0 | 3.25e-01 | 90.4% | 62.1% |
| 2co5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 38.0 | 3.25e-01 | 78.8% | 71.7% |
| 3ajdA01 | 3.30.70.1170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 | 0.53 | 37.0 | 3.65e-01 | 92.3% | 66.7% |
| 6u9hF02 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.53 | 36.0 | 3.21e-01 | 71.2% | 85.7% |
| 3zcoA00 | 1.10.10.2450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.52 | 44.0 | 3.41e-01 | 100.0% | 71.7% |
| 1k3sA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.52 | 40.0 | 3.36e-01 | 94.2% | 50.0% |
| 2e9yB00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.52 | 44.0 | 2.76e-01 | 100.0% | 32.7% |
| 2fgcA03 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.51 | 35.0 | 3.26e-01 | 98.1% | 50.0% |
| 1jqgA01 | 3.30.70.340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Metallocarboxypeptidase-like | 0.51 | 36.0 | 3.08e-01 | 98.1% | 44.0% |
| 1kafA00 | 3.90.1150.20 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription regulator MotA, C-terminal domain | 0.51 | 41.0 | 3.41e-01 | 100.0% | 71.3% |
| 2v0cA03 | 2.30.210.10 | Mainly Beta › Roll › Leucyl-tRNA synthetase, domain 3 › Leucyl-tRNA synthetase, domain 3 | 0.51 | 41.0 | 4.00e-01 | 92.3% | 96.5% |
| 5eriA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 39.0 | 2.93e-01 | 90.4% | 48.4% |
| 1yqtA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 36.0 | 2.38e-01 | 76.9% | 50.2% |
| 2oh1C00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 39.0 | 2.98e-01 | 100.0% | 54.1% |
| 2dy1A03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.51 | 37.0 | 3.43e-01 | 84.6% | 63.2% |
| 1jyoA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.50 | 42.0 | 3.27e-01 | 100.0% | 46.2% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1518821 | 304.7.1.8 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › ORF_2_N | 0.70 | 47.0 | 3.50e-01 | 94.2% | 27.7% |
| 5015409 | 327.11.2.83 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_DUF2096_C | 0.63 | 45.0 | 4.49e-01 | 80.8% | 72.7% |
| 3637371 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.61 | 47.0 | 3.88e-01 | 100.0% | 44.8% |
| 3597966 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 50.0 | 4.23e-01 | 100.0% | 58.9% |
| 5003842 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.59 | 45.0 | 3.24e-01 | 90.4% | 85.5% |
| 3631329 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.57 | 43.0 | 3.87e-01 | 82.7% | 58.7% |
| 3188677 | 306.3.1.2 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › Img2 | 0.57 | 47.0 | 4.18e-01 | 100.0% | 63.7% |
| 5056954 | 305.1.1.0 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase | 0.57 | 42.0 | 3.81e-01 | 96.2% | 57.3% |
| 5029321 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 42.0 | 3.02e-01 | 84.6% | 37.1% |
| 5038997 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.56 | 37.0 | 3.59e-01 | 92.3% | 56.9% |
| 4487980 | 327.11.2.60 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_SLS1_2 | 0.56 | 40.0 | 3.85e-01 | 92.3% | 65.0% |
| 5071114 | 2003.1.7.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › CoA_trans | 0.55 | 43.0 | 2.74e-01 | 100.0% | 16.3% |
| 4471453 | 327.16.1.10 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › PF29189 | 0.55 | 38.0 | 3.72e-01 | 92.3% | 65.0% |
| 3296733 | 5104.1.1.2 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › CDC45 | 0.55 | 43.0 | 3.21e-01 | 88.5% | 83.5% |
| 5072937 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.54 | 45.0 | 3.28e-01 | 100.0% | 47.6% |
| 4968678 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.54 | 36.0 | 2.57e-01 | 71.2% | 29.0% |
| 5072893 | 2003.1.7.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › CoA_trans | 0.54 | 42.0 | 2.72e-01 | 100.0% | 16.7% |
| 3734074 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.54 | 39.0 | 3.70e-01 | 84.6% | 70.0% |
| 5012881 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.53 | 36.0 | 3.39e-01 | 98.1% | 54.3% |
| 3830976 | 327.11.2.33 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_DEAH11_2nd | 0.53 | 41.0 | 3.66e-01 | 84.6% | 65.3% |
| 5047775 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.53 | 43.0 | 3.81e-01 | 100.0% | 87.1% |
| 4263309 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.53 | 34.0 | 3.42e-01 | 82.7% | 63.6% |
| 4021026 | 304.112.1.0 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain | 0.53 | 38.0 | 3.31e-01 | 82.7% | 52.2% |
| 4932713 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.53 | 38.0 | 2.52e-01 | 80.8% | 50.7% |
| 3738318 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.52 | 39.0 | 3.48e-01 | 82.7% | 60.0% |
| 4457666 | 304.22.1.1 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C | 0.52 | 37.0 | 3.37e-01 | 84.6% | 52.5% |
| 5022242 | 2003.1.5.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltr_RsmB-F | 0.52 | 36.0 | 2.34e-01 | 84.6% | 13.3% |
| 5069114 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.52 | 40.0 | 3.40e-01 | 86.5% | 56.7% |
| 4011335 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.52 | 34.0 | 3.36e-01 | 82.7% | 60.0% |
| 4073616 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.51 | 39.0 | 3.67e-01 | 86.5% | 75.4% |
| 3970519 | 327.16.1.10 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › PF29189 | 0.51 | 35.0 | 3.41e-01 | 82.7% | 65.0% |
| 3194528 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.51 | 36.0 | 3.17e-01 | 78.8% | 54.1% |
| 5068942 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.51 | 38.0 | 3.48e-01 | 86.5% | 60.0% |
| 3300188 | 101.1.2.496 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_eIF2D | 0.51 | 40.0 | 3.47e-01 | 100.0% | 73.0% |
| 3272707 | 327.11.2.39 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_PARP14_3 | 0.51 | 35.0 | 3.40e-01 | 92.3% | 63.1% |
| 5076264 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.51 | 36.0 | 3.47e-01 | 96.2% | 64.6% |
| 4631988 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.51 | 40.0 | 2.77e-01 | 90.4% | 27.7% |
| 3189627 | 327.11.2.50 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF26118 | 0.50 | 33.0 | 3.29e-01 | 88.5% | 61.7% |
| 3330429 | 101.1.9.83 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › TRM | 0.50 | 41.0 | 3.39e-01 | 100.0% | 76.4% |
| 176932 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.50 | 40.0 | 2.75e-01 | 90.4% | 27.7% |
| 5079044 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 42.0 | 3.81e-01 | 100.0% | 77.3% |
| 3500170 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 42.0 | 3.63e-01 | 100.0% | 60.0% |