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NC_049851.1__YP_009904541.1__H1O17_gp163__00163

Bact-Vir

Identity

Accession:: NC_049851 ↗
Kingdom:: phage

Quality

91.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Sarumanvirus› Burkholderia_phage_BcepSauron

TaxID: 2530033

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-103

PDB

Domain cluster: rep: KY448244.1__AQT28798.1__YOLOSWAG_330__00330__D17-106

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4e1pA00	3.30.60.230	Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain	0.67	37.0	4.70e-01	96.8%	92.7%
1w36C06	1.10.10.990	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A ›	0.64	43.0	4.83e-01	90.5%	91.7%
1c5aA00	1.20.91.20	Mainly Alpha › Up-down Bundle › Influenza Virus Matrix Protein; Chain A, domain 1 › Anaphylotoxins (complement system)	0.62	39.0	4.46e-01	100.0%	90.8%
3jr1A02	3.90.1200.10	Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe	0.61	45.0	3.60e-01	77.9%	82.7%
2bzlA00	3.90.190.10	Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily	0.59	46.0	3.28e-01	84.2%	70.1%
2innB00	1.10.620.20	Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A	0.53	45.0	2.89e-01	94.7%	48.1%
2bkkC02	3.90.1200.10	Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe	0.53	41.0	3.47e-01	86.3%	76.9%
2ze7A02	1.10.287.890	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain	0.52	30.0	2.97e-01	96.8%	50.0%
2mtqA00	1.20.58.130	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.52	36.0	4.08e-01	88.4%	95.9%
4q2cA01	1.10.3210.30	Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 ›	0.52	43.0	3.10e-01	89.5%	95.1%
3gzkA02	1.50.10.10	Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase ›	0.51	42.0	2.80e-01	94.7%	49.1%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5004578	101.1.1.545 ↗	alpha arrays › HTH › HTH › Three-helical HTH › DUF1699	0.62	39.0	4.64e-01	87.4%	100.0%
5001590	101.35.1.0 ↗	alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX	0.62	36.0	4.53e-01	100.0%	100.0%
4990527	101.1.10.0 ↗	alpha arrays › HTH › HTH › Cyclin-like	0.57	39.0	3.67e-01	71.6%	71.7%
3789309	189.1.1.2 ↗	alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP › RhoGAP	0.52	42.0	3.19e-01	88.4%	72.3%
3699443	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.50	38.0	3.52e-01	77.9%	92.2%
3471712	604.8.1.0 ↗	alpha bundles › Spectrin repeat-like › Smac/diablo › Smac/diablo	0.50	37.0	3.36e-01	76.8%	90.4%

D2 high residues 119-154

PDB

Domain cluster: representative

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2p5vA01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.75	56.0	5.08e-01	86.1%	59.6%
1qh5A00	3.60.15.10	Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	0.64	51.0	3.13e-01	97.2%	36.9%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3691294	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.64	53.0	4.05e-01	94.4%	60.0%