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NC_049851.1__YP_009904551.1__H1O17_gp173__00173

Bact-Vir

NC_049851.1__YP_009904551.1__H1O17_gp173__00173

Identity

Accession:
NC_049851 ↗
Kingdom:
phage

Quality

84.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 43-195
PDB
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2i87B02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.66 40.0 3.98e-01 83.7% 56.6%
1kblA06 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.66 40.0 4.88e-01 83.0% 94.9%
5oomJ01 3.30.1550.10 Alpha Beta › 2-Layer Sandwich › Ribosomal protein L11, N-terminal domain › Ribosomal protein L11/L12, N-terminal domain 0.61 29.0 4.10e-01 84.3% 100.0%
4ffeX00 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.57 48.0 4.91e-01 99.3% 90.7%
1zs7A01 3.10.450.120 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 0.57 26.0 3.13e-01 95.4% 60.6%
7q61A01 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 29.0 3.40e-01 79.7% 69.7%
4g2sA00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.55 32.0 3.71e-01 94.8% 80.2%
3wodG00 2.30.30.1250 Mainly Beta › Roll › SH3 type barrels. › 0.55 29.0 3.16e-01 100.0% 58.3%
7alkA01 2.60.40.3510 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 37.0 3.66e-01 86.3% 66.9%
1lqvB00 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.53 48.0 4.63e-01 99.3% 92.5%
2aj7A00 2.30.290.10 Mainly Beta › Roll › BH3618-like › BH3618-like 0.51 35.0 3.56e-01 95.4% 67.5%
2p0wA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 30.0 3.26e-01 88.2% 66.2%
3hlkA01 2.60.40.2240 Mainly Beta › Sandwich › Immunoglobulin-like › Acyl-CoA thioester hydrolase/BAAT N-terminal domain 0.50 33.0 3.56e-01 81.0% 75.6%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5010547 4.26.1.0 beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 0.74 28.0 4.15e-01 86.9% 77.1%
4844428 295.1.1.4 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain 0.72 26.0 3.73e-01 85.6% 68.0%
3778237 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.58 45.0 3.74e-01 93.5% 47.8%
150881 233.1.1.0 a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain 0.57 48.0 4.91e-01 99.3% 90.7%
3232466 2007.1.2.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.54 45.0 3.64e-01 87.6% 86.7%
3629780 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.51 35.0 2.64e-01 99.3% 27.8%
3273076 213.1.1.2 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1,Hat1_N 0.51 36.0 3.59e-01 93.5% 69.7%
3702616 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.51 28.0 3.05e-01 85.0% 64.0%
1512999 3953.1.1.0 a+b two layers › Csd3 N-terminal domain › Csd3 N-terminal domain › Csd3 N-terminal domain 0.50 33.0 3.94e-01 91.5% 100.0%