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NC_049851.1__YP_009904574.1__H1O17_gp196__00196

Bact-Vir

NC_049851.1__YP_009904574.1__H1O17_gp196__00196

Identity

Accession:
NC_049851 ↗
Kingdom:
phage

Quality

72.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 20-80
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5yk4A03 1.10.1420.10 Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › 0.66 57.0 4.27e-01 95.1% 69.4%
2fu2A00 1.20.1440.50 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like 0.63 43.0 4.00e-01 77.0% 55.1%
2rfqB01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.55 45.0 3.89e-01 100.0% 61.5%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3740779 604.12.1.2 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Vta1 0.67 46.0 4.29e-01 70.5% 72.0%
4432304 3390.1.1.0 extended segments › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT 0.67 45.0 4.87e-01 72.1% 84.0%
4076265 3390.1.1.0 extended segments › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT 0.66 44.0 4.86e-01 72.1% 84.0%
3697800 3559.1.1.0 a+b complex topology › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 0.62 44.0 3.62e-01 75.4% 42.6%
4965834 605.4.1.0 alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein 0.61 44.0 3.97e-01 77.0% 56.5%