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NC_049851.1__YP_009904634.1__H1O17_gp256__00256

Bact-Vir

NC_049851.1__YP_009904634.1__H1O17_gp256__00256

Identity

Accession:
NC_049851 ↗
Kingdom:
phage

Quality

67.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 359-441
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ob9A00 3.30.2220.20 Alpha Beta › 2-Layer Sandwich › rbstp2171 › Phage tail assembly chaperone gp13-like 0.58 49.0 4.64e-01 100.0% 82.2%
4boqA00 3.90.70.80 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.54 42.0 3.46e-01 90.4% 93.7%
1bccB02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.52 37.0 2.96e-01 75.9% 52.4%
2q37A00 1.10.3330.10 Mainly Alpha › Orthogonal Bundle › UraD-like › Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase 0.52 39.0 3.37e-01 81.9% 51.4%
2q7rB00 1.20.120.550 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Membrane associated eicosanoid/glutathione metabolism-like domain 0.51 38.0 3.24e-01 80.7% 85.7%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3586672 6050.1.1.0 a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone 0.69 61.0 5.71e-01 100.0% 81.0%
3424988 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.58 40.0 4.15e-01 71.1% 89.3%
3264136 3444.1.1.0 alpha arrays › DP domain › DP domain › DP domain 0.56 35.0 3.47e-01 100.0% 58.8%
3585882 633.1.1.1 alpha bundles › Bromodomain-like › Bromodomain › Bromodomain › Bromodomain 0.53 43.0 3.55e-01 91.6% 84.4%
3364515 611.7.1.11 alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain › DUF7032 0.52 38.0 3.27e-01 77.1% 83.0%
3241981 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.51 39.0 3.62e-01 83.1% 100.0%
3689514 3924.1.1.0 alpha complex topology › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Sterol uptake control protein 2 0.51 39.0 2.84e-01 83.1% 29.8%
D2 medium residues 199-280
PDB