←Back to structures

NC_049851.1__YP_009904666.1__H1O17_gp288__00288

Bact-Vir

Identity

Accession:: NC_049851 ↗
Kingdom:: phage

Quality

82.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Sarumanvirus› Burkholderia_phage_BcepSauron

TaxID: 2530033

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-140

PDB

Domain cluster: rep: ON615601.1__UTS51982.1__X__00034__D5-121

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF12571.14 best	Phage_tail_fib	24.2	4.10e-05	92.8%	82.7%

D2 high residues 420-500

PDB

Domain cluster: rep: OQ632216.1__WGL32639.1__Arash_gp188__00188__D185-268

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3d4eA01	3.30.1450.10	Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 ›	0.63	40.0	3.99e-01	90.1%	61.9%
2v7sA00	3.30.2030.20	Alpha Beta › 2-Layer Sandwich › TBP-like ›	0.62	42.0	3.29e-01	91.4%	33.1%
2jkgA00	3.30.450.30	Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic	0.60	48.0	3.86e-01	96.3%	43.0%
3kyaA02	2.120.10.30	Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain	0.58	51.0	3.34e-01	100.0%	44.4%
6i8xA00	2.40.128.20	Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain	0.57	46.0	3.81e-01	87.7%	55.0%
2a0aA00	2.40.128.20	Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain	0.57	44.0	3.79e-01	84.0%	55.7%
1bxwA00	2.40.160.20	Mainly Beta › Beta Barrel › Porin ›	0.56	44.0	3.45e-01	84.0%	56.4%
5nldB00	2.60.120.200	Mainly Beta › Sandwich › Jelly Rolls ›	0.55	45.0	3.75e-01	87.7%	78.3%
5gm0A01	2.60.120.200	Mainly Beta › Sandwich › Jelly Rolls ›	0.55	42.0	3.44e-01	81.5%	50.0%
4o9dA00	2.130.10.10	Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase	0.55	47.0	3.10e-01	100.0%	32.0%
3ei3A02	2.130.10.10	Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase	0.54	47.0	3.17e-01	100.0%	41.7%

ECOD (19)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4023269	4099.1.1.0 ↗	a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like	0.70	47.0	4.26e-01	93.8%	51.8%
4082107	7089.1.1.3 ↗	a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › MmoD	0.69	38.0	4.07e-01	88.9%	61.4%
3168452	331.10.2.3 ↗	a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › Med1	0.69	45.0	4.14e-01	91.4%	52.4%
3972316	809.1.1.0 ↗	a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP	0.67	40.0	4.40e-01	90.1%	73.8%
3388849	220.1.1.0 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like	0.64	45.0	3.77e-01	75.3%	51.7%
5014686	809.2.1.0 ↗	a+b two layers › BLIP-like › BT0923-like › BT0923-like	0.62	40.0	4.67e-01	88.9%	96.4%
3238997	9.1.1.0 ↗	beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins	0.61	43.0	3.62e-01	100.0%	45.1%
5041833	243.3.1.0 ↗	a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin	0.59	45.0	4.85e-01	100.0%	100.0%
4474202	809.1.1.7 ↗	a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › DUF6392	0.57	39.0	4.00e-01	91.4%	73.1%
3222106	223.2.1.0 ↗	a+b three layers › Profilin-like › profilin-like › profilin-like	0.57	42.0	3.76e-01	93.8%	54.2%
3505545	10.1.1.4 ↗	beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin	0.57	46.0	3.88e-01	87.7%	79.3%
5041112	243.3.1.0 ↗	a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin	0.56	42.0	4.41e-01	87.7%	91.4%
3706074	5.1.4.0 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed	0.56	50.0	3.25e-01	100.0%	34.7%
3934185	9.1.1.0 ↗	beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins	0.56	47.0	3.96e-01	97.5%	54.7%
4952059	809.2.1.0 ↗	a+b two layers › BLIP-like › BT0923-like › BT0923-like	0.55	41.0	4.16e-01	90.1%	82.5%
3788785	5.1.5.18 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Vps16_N	0.55	49.0	3.03e-01	100.0%	34.3%
4405848	5.1.3.154 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF30361	0.54	47.0	3.10e-01	100.0%	30.9%
3830450	2003.1.5.0 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases	0.54	40.0	2.66e-01	79.0%	20.7%
None	—		0.53	45.0	3.01e-01	98.8%	25.1%

D3 high residues 580-688

PDB

Domain cluster: representative

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3617870	220.1.1.0 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like	0.53	37.0	3.44e-01	73.4%	83.4%
3594322	5.1.4.242 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PEP5_VPS11_N	0.51	35.0	2.41e-01	70.6%	93.4%

D4 high residues 696-810

PDB

Domain cluster: rep: IMGVR_UViG_3300015214_002962-3300015214-Ga0172382_100065621__D24-131

D5 medium residues 141-279

PDB

Domain cluster: rep: AB366653.2__BAG41619.2__X__00171__D152-272