←Back to structures
NC_049851.1__YP_009904739.1__H1O17_gp361__00361
Bact-VirNC_049851.1__YP_009904739.1__H1O17_gp361__00361
Identity
- Accession:
- NC_049851 ↗
- Kingdom:
- phage
Quality
59.3
mean pLDDT
Taxonomy
TaxID: 2530033
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 96-132
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26207.1 best | Phage_phiTE_015 | 29.4 | 1.20e-06 | 100.0% | 46.2% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5d8nA01 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.65 | 46.0 | 3.01e-01 | 81.1% | 29.3% |
| 3elbA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.64 | 44.0 | 2.88e-01 | 100.0% | 15.2% |
| 5i41B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.62 | 53.0 | 4.33e-01 | 100.0% | 52.2% |
| 6g1dA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 46.0 | 3.81e-01 | 100.0% | 82.9% |
| 2ivxB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.58 | 51.0 | 3.60e-01 | 100.0% | 76.5% |
| 7qttV01 | 2.40.100.10 | Mainly Beta › Beta Barrel › Cyclophilin › Cyclophilin-like | 0.56 | 43.0 | 2.96e-01 | 89.2% | 88.0% |
| 3w6bB00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.54 | 46.0 | 3.12e-01 | 100.0% | 24.2% |
| 1wh4A01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.54 | 38.0 | 3.07e-01 | 83.8% | 94.7% |
| 3q3vA01 | 3.40.50.1260 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate kinase, N-terminal domain | 0.53 | 42.0 | 2.83e-01 | 97.3% | 75.6% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3436945 | 3562.1.1.0 ↗ | alpha bundles › Calcium release-activated calcium channel protein 1 › Calcium release-activated calcium channel protein 1 › Calcium release-activated calcium channel protein 1 | 0.69 | 53.0 | 2.99e-01 | 86.5% | 55.5% |
| 3558124 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.68 | 48.0 | 4.41e-01 | 100.0% | 56.0% |
| 3225159 | 101.1.2.460 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_DDX60 | 0.58 | 48.0 | 3.47e-01 | 100.0% | 33.3% |
| 5022580 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 47.0 | 3.51e-01 | 91.9% | 60.0% |
| 3215885 | 188.1.1.1 ↗ | alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep | 0.56 | 50.0 | 3.01e-01 | 100.0% | 44.7% |
| 4024810 | 375.10.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha | 0.55 | 50.0 | 4.18e-01 | 100.0% | 76.7% |
| 3233807 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.53 | 47.0 | 3.74e-01 | 97.3% | 70.0% |
| 3947114 | 192.29.1.167 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › MscS_TM | 0.52 | 44.0 | 2.61e-01 | 100.0% | 11.6% |