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NC_049857.1__YP_009905591.1__H1Z36_gp072__00072
Bact-VirNC_049857.1__YP_009905591.1__H1Z36_gp072__00072
Identity
- Accession:
- NC_049857 ↗
- Kingdom:
- phage
Quality
92.3
mean pLDDT
Taxonomy
TaxID: 2662295
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-73
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1kl9A02 | 1.10.150.190 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 | 0.60 | 47.0 | 4.27e-01 | 100.0% | 62.0% |
| 2qvwA04 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.58 | 52.0 | 3.97e-01 | 100.0% | 64.8% |
| 3nbiA01 | 1.10.8.1020 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › RecQ-mediated genome instability protein 1, N-terminal domain | 0.58 | 41.0 | 4.31e-01 | 98.5% | 84.5% |
| 2jnsA01 | 1.20.1270.220 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.57 | 46.0 | 4.33e-01 | 100.0% | 75.3% |
| 3qwlA02 | 1.10.8.680 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ypt/Rab-GAP domain of gyp1p, domain 2 | 0.55 | 46.0 | 4.40e-01 | 93.8% | 100.0% |
| 2e9fB01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.54 | 41.0 | 3.58e-01 | 80.0% | 88.5% |
| 4ojmX02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.54 | 39.0 | 3.43e-01 | 78.5% | 97.1% |
| 3wscA00 | 1.20.1420.20 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › M75 peptidase, HXXE motif | 0.53 | 42.0 | 2.84e-01 | 89.2% | 35.1% |
| 3cx5A02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.53 | 40.0 | 2.85e-01 | 84.6% | 62.3% |
| 1fioA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 38.0 | 2.84e-01 | 80.0% | 67.9% |
| 2qgsB01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.52 | 46.0 | 4.19e-01 | 100.0% | 97.7% |
| 2vwaA00 | 1.20.58.1330 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Plasmodium falciparum UIS3 membrane protein | 0.52 | 38.0 | 3.30e-01 | 76.9% | 51.5% |
| 2cazE00 | 1.20.1440.200 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Vps28 N-terminal domain | 0.51 | 35.0 | 3.06e-01 | 89.2% | 45.5% |
| 3c65A00 | 3.30.420.340 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › UvrC, RNAse H endonuclease domain | 0.51 | 42.0 | 3.28e-01 | 95.4% | 88.1% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3545484 | 103.1.1.53 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › TTC3_9th | 0.69 | 47.0 | 4.76e-01 | 96.9% | 70.8% |
| 4243821 | 3317.1.1.0 ↗ | alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain | 0.68 | 44.0 | 4.29e-01 | 98.5% | 61.4% |
| 4942968 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 41.0 | 4.08e-01 | 93.8% | 62.3% |
| 3281755 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.60 | 46.0 | 4.82e-01 | 100.0% | 91.7% |
| 3878969 | 101.1.1.221 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CCDC106 | 0.57 | 42.0 | 3.75e-01 | 81.5% | 78.0% |
| 3174391 | 148.1.1.26 ↗ | alpha arrays › Histone-like › Histone-related › Histone › NST1 | 0.57 | 43.0 | 3.50e-01 | 92.3% | 41.5% |
| 3977441 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.54 | 46.0 | 4.05e-01 | 93.8% | 74.7% |
| 3405912 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.53 | 41.0 | 2.98e-01 | 83.1% | 68.6% |
| 5071393 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.52 | 41.0 | 3.21e-01 | 87.7% | 72.0% |
| 3791 | 603.1.1.1 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin | 0.52 | 38.0 | 2.84e-01 | 80.0% | 67.9% |
| 3207317 | 192.7.1.23 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › zf-C4pol | 0.50 | 35.0 | 2.99e-01 | 87.7% | 47.0% |