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NC_049857.1__YP_009905592.1__H1Z36_gp073__00073

Bact-Vir

NC_049857.1__YP_009905592.1__H1Z36_gp073__00073

Identity

Accession:
NC_049857 ↗
Kingdom:
phage

Quality

85.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Audreyjarvisvirus› Lactococcus_phage_P1048

TaxID: 2662295

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-88
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hr6C01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.57 45.0 3.86e-01 85.5% 83.1%
4a7kA03 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.55 49.0 3.99e-01 98.8% 89.2%
2kr7A02 2.40.10.330 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.52 24.0 2.82e-01 73.5% 59.6%
3h6rA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.52 40.0 3.34e-01 84.3% 92.8%
3jtzA00 3.30.160.390 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain 0.52 30.0 3.11e-01 83.1% 58.4%
3h6qA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.51 44.0 3.57e-01 98.8% 53.0%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4526589 6.1.1.4 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Ricin_B_lectin 0.61 47.0 4.07e-01 85.5% 87.4%
3313861 4325.1.1.10 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF659 0.56 33.0 3.87e-01 85.5% 87.3%
4011588 4325.1.1.0 ↗ mixed a+b and a/b › YegP-like › YegP-like › YegP-like 0.55 33.0 3.44e-01 85.5% 64.0%
3342974 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.54 34.0 3.36e-01 85.5% 57.8%
3444325 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.54 35.0 2.77e-01 88.0% 30.3%
3676186 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.53 33.0 3.37e-01 85.5% 61.2%
3363185 2484.1.1.106 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.52 34.0 2.31e-01 88.0% 16.6%
3485875 827.1.1.0 ↗ a+b two layers › Integrin beta tail domain › Integrin beta tail domain › Integrin beta tail domain 0.52 28.0 2.73e-01 80.7% 44.2%
3592742 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.52 40.0 3.93e-01 83.1% 98.9%
4968450 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.51 30.0 3.45e-01 84.3% 87.3%